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Os01g0511200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0217) R2 : 0.649
β1 : 0.736 (0.0794) R2dD : 0.0685 R2D : 0.0609
β2 : 1.54 (0.0562) R2dC : 0.583 R2C : 0.575
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0643 (0.0463) R2dN8 : 0.00199 R2N8 : 0.00577
σ : 0.408
deviance : 75.83
__
_____
C
peak time of C : 16.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.4 0.383 11 -0.08 1.5 0.247 0.487 -5.67 -0.14 17 31.19 1200 -- --
69.93 0.389 10.9 0.815 1.49 -0.304 0.372 -- -0.0581 16.9 28.39 2665 -- --
66.99 0.381 11 -0.0707 1.5 0.239 -- -5.67 -0.141 17 31.3 1193 -- --
69.25 0.388 10.9 0.84 1.5 -0.358 -- -- -0.135 17 31.35 5506 -- --
184.05 0.632 11 -0.039 -- 0.0887 -- -5.59 -0.21 -- 31.67 1229 -- --
74.97 0.406 10.9 0.734 1.54 -- 0.579 -- -0.0672 16.9 -- -- -- --
75.83 0.408 10.9 0.736 1.54 -- -- -- -0.0643 16.9 -- -- -- --
185.99 0.635 10.9 0.938 -- -0.454 -- -- -0.142 -- 33.5 6902 -- --
87.02 0.434 10.9 -- 1.49 -0.273 -- -- -0.199 17 31.8 5505 -- --
201.59 0.663 10.9 0.679 -- -- -- -- -0.104 -- -- -- -- --
90.09 0.444 10.9 -- 1.53 -- -- -- -0.146 16.9 -- -- -- --
202.03 0.662 10.9 -- -- -0.408 -- -- -0.204 -- 33.62 6916 -- --
213.74 0.682 10.9 -- -- -- -- -- -0.179 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.49 wind 5.0 90 < th dose independent rect. 3 5
2 55.85 wind 5.0 270 < th dose independent rect. 3 2
3 56.18 temperature 10.0 90 > th dose dependent rect. 3 5
4 56.24 precipitation 0.1 90 < th dose independent rect. 3 5
5 56.24 precipitation 0.1 90 < th dose dependent rect. 3 5
6 56.40 wind 9.0 90 < th dose dependent rect. 3 5
9 56.63 precipitation 0.1 90 < th dose independent rect. 8 19
10 56.63 precipitation 0.1 90 < th dose dependent rect. 8 19
11 56.64 precipitation 0.1 270 < th dose independent rect. 3 2
12 56.64 precipitation 0.1 270 < th dose dependent rect. 3 2
14 56.67 temperature 10.0 90 > th dose independent rect. 3 5
16 56.67 temperature 30.0 90 < th dose independent rect. 3 5
17 56.67 humidity 50.0 90 > th dose independent rect. 3 5
19 56.67 atmosphere 995.0 90 > th dose independent rect. 3 5
20 56.67 atmosphere 1015.0 90 < th dose independent rect. 3 5
21 56.67 temperature 10.0 90 > th dose independent rect. 8 19
22 56.75 radiation 40.0 90 < th dose independent rect. 3 5
23 56.80 wind 9.0 90 < th dose independent rect. 8 19
26 57.11 wind 9.0 270 < th dose dependent rect. 3 2
29 57.35 temperature 10.0 270 > th dose independent rect. 3 2
31 57.35 temperature 30.0 270 < th dose independent rect. 3 2
32 57.35 humidity 50.0 270 > th dose independent rect. 3 2
35 57.35 atmosphere 995.0 270 > th dose independent rect. 3 2
36 57.35 atmosphere 1010.0 270 < th dose independent rect. 3 2
38 57.35 radiation 20.0 270 < th dose independent rect. 3 2
41 57.35 temperature 10.0 270 > th dose independent rect. 5 22
43 57.37 radiation 1.0 270 < th dose dependent rect. 3 2
44 57.37 radiation 40.0 270 < th dose dependent rect. 3 2
48 57.44 radiation 1.0 270 < th dose independent rect. 3 2
50 57.52 wind 9.0 270 < th dose independent rect. 5 22
57 57.76 atmosphere 995.0 90 > th dose independent rect. 8 19
60 57.83 temperature 10.0 270 > th dose dependent rect. 3 2
62 57.89 wind 5.0 10 < th dose independent rect. 4 5
63 57.89 temperature 10.0 10 > th dose dependent rect. 3 6
67 57.96 wind 9.0 10 < th dose dependent rect. 4 5
68 58.03 precipitation 0.1 10 < th dose independent rect. 3 6
69 58.03 precipitation 0.1 10 < th dose dependent rect. 3 6
74 58.22 wind 5.0 270 < th dose independent rect. 1 6
87 58.41 temperature 10.0 10 > th dose independent rect. 4 5
89 58.41 temperature 30.0 10 < th dose independent rect. 4 5
90 58.41 humidity 50.0 10 > th dose independent rect. 4 5
92 58.41 atmosphere 995.0 10 > th dose independent rect. 4 5
93 58.41 atmosphere 1015.0 10 < th dose independent rect. 4 5
94 58.41 temperature 10.0 10 > th dose independent rect. 9 19
96 58.42 humidity 50.0 270 > th dose dependent rect. 3 2
101 58.47 precipitation 0.1 270 < th dose independent rect. 5 22
102 58.47 precipitation 0.1 270 < th dose dependent rect. 5 22
109 58.55 wind 9.0 10 < th dose independent rect. 9 19
121 58.68 precipitation 0.1 10 < th dose independent rect. 9 18
122 58.68 precipitation 0.1 10 < th dose dependent rect. 9 18
141 58.79 radiation 40.0 10 < th dose independent rect. 4 5
187 58.94 temperature 15.0 90 > th dose independent rect. 15 17
215 59.01 atmosphere 1015.0 270 < th dose dependent rect. 3 2
262 59.20 atmosphere 995.0 10 > th dose independent rect. 9 19
301 59.38 atmosphere 1015.0 90 < th dose dependent rect. 3 5
307 59.45 wind 1.0 270 > th dose independent rect. 3 2
313 59.47 precipitation 0.1 90 < th dose independent rect. 8 7
314 59.47 precipitation 0.1 90 < th dose dependent rect. 8 7
330 59.52 precipitation 0.1 270 < th dose independent rect. 1 6
333 59.52 precipitation 0.1 270 < th dose dependent rect. 1 6
340 59.58 temperature 10.0 90 > th dose independent rect. 8 7
341 59.58 atmosphere 1015.0 90 < th dose independent rect. 8 7
343 59.58 radiation 40.0 90 < th dose dependent rect. 3 6
355 59.65 temperature 10.0 1440 > th dose independent rect. 4 6
358 59.65 atmosphere 995.0 1440 > th dose independent rect. 4 6
359 59.65 atmosphere 1015.0 1440 < th dose independent rect. 4 6
360 59.65 temperature 10.0 1440 > th dose independent rect. 10 18
372 59.70 atmosphere 995.0 90 > th dose independent rect. 8 7
374 59.71 precipitation 0.1 270 < th dose independent rect. 6 20
376 59.71 atmosphere 995.0 90 > th dose dependent rect. 3 5
377 59.71 precipitation 0.1 270 < th dose dependent rect. 6 20
393 59.76 radiation 1.0 90 > th dose independent rect. 8 7
398 59.78 radiation 40.0 90 < th dose independent rect. 15 17
399 59.78 atmosphere 1015.0 90 < th dose independent rect. 8 19
402 59.80 humidity 50.0 90 > th dose dependent rect. 3 5
404 59.81 radiation 20.0 270 < th dose independent rect. 1 7
405 59.82 wind 9.0 90 < th dose independent rect. 15 17
417 59.89 wind 9.0 90 < th dose independent rect. 8 7
420 59.90 temperature 15.0 10 > th dose independent rect. 15 18
422 59.91 wind 1.0 90 > th dose independent rect. 8 7
437 59.97 atmosphere 1015.0 10 < th dose dependent rect. 4 5
448 59.98 humidity 70.0 270 > th dose independent rect. 1 6
451 59.99 temperature 10.0 270 > th dose independent rect. 1 6
453 59.99 temperature 30.0 270 < th dose independent rect. 1 6
454 59.99 humidity 50.0 270 > th dose independent rect. 1 6
456 59.99 atmosphere 995.0 270 > th dose independent rect. 1 6
457 59.99 atmosphere 1015.0 270 < th dose independent rect. 1 6
465 60.03 humidity 50.0 90 > th dose independent rect. 8 19
496 60.14 radiation 30.0 90 < th dose independent rect. 3 8
499 60.15 precipitation 0.1 270 < th dose independent rect. 6 8
501 60.15 precipitation 0.1 270 < th dose dependent rect. 6 8
502 60.16 radiation 40.0 270 < th dose dependent rect. 1 7
518 60.23 temperature 10.0 270 > th dose independent rect. 6 8
519 60.23 atmosphere 995.0 270 > th dose independent rect. 6 8
520 60.23 atmosphere 1015.0 270 < th dose independent rect. 6 8
522 60.24 precipitation 0.1 270 < th dose independent rect. 14 16
524 60.24 precipitation 0.1 270 < th dose dependent rect. 14 16
525 60.25 wind 9.0 1440 < th dose independent rect. 4 5
529 60.25 humidity 50.0 1440 > th dose independent rect. 4 5
533 60.25 wind 9.0 270 < th dose independent rect. 6 8
534 60.25 atmosphere 995.0 90 > th dose independent rect. 15 17
555 60.31 radiation 1.0 10 > th dose independent rect. 9 6
591 60.37 atmosphere 1015.0 90 < th dose independent rect. 15 17
641 60.55 humidity 50.0 90 > th dose independent rect. 8 7
645 60.57 precipitation 0.1 10 < th dose independent rect. 15 18
646 60.57 precipitation 0.1 10 < th dose dependent rect. 15 18
655 60.61 atmosphere 995.0 270 > th dose dependent rect. 3 2
658 60.62 temperature 10.0 10 > th dose independent rect. 9 6
660 60.62 atmosphere 995.0 10 > th dose independent rect. 9 6
661 60.62 atmosphere 1015.0 10 < th dose independent rect. 9 6
662 60.62 precipitation 0.1 10 < th dose independent rect. 9 6
667 60.62 precipitation 0.1 10 < th dose dependent rect. 9 6
712 60.77 temperature 15.0 270 > th dose independent rect. 11 10
722 60.81 humidity 50.0 90 > th dose independent rect. 15 17
742 60.85 wind 9.0 10 < th dose independent rect. 15 18
744 60.86 atmosphere 995.0 270 > th dose independent rect. 5 22
754 60.88 atmosphere 1000.0 270 > th dose independent rect. 19 7
762 60.89 humidity 50.0 10 > th dose independent rect. 9 19
763 60.89 atmosphere 995.0 270 > th dose independent rect. 6 20
765 60.90 temperature 15.0 90 > th dose independent rect. 17 15
767 60.90 wind 1.0 90 > th dose independent rect. 8 19
768 60.92 atmosphere 1005.0 90 > th dose independent rect. 3 5
781 60.96 radiation 1.0 270 < th dose dependent rect. 18 8
784 60.97 wind 9.0 10 < th dose independent rect. 9 6
788 60.98 humidity 50.0 270 > th dose independent rect. 6 8
808 61.00 humidity 50.0 270 > th dose dependent rect. 19 7
811 61.01 atmosphere 1015.0 10 < th dose independent rect. 15 18
813 61.02 temperature 10.0 1440 > th dose independent rect. 10 6
816 61.02 precipitation 0.1 270 < th dose independent rect. 2 17
817 61.02 temperature 10.0 1440 > th dose independent rect. 16 18
820 61.02 precipitation 0.1 270 < th dose dependent rect. 2 17
825 61.03 radiation 1.0 270 < th dose independent rect. 18 8
838 61.07 atmosphere 995.0 10 > th dose dependent rect. 4 5
843 61.10 humidity 50.0 270 > th dose independent rect. 21 14
846 61.11 wind 9.0 90 < th dose dependent rect. 8 19
848 61.13 radiation 40.0 10 < th dose independent rect. 15 18
851 61.14 atmosphere 995.0 10 > th dose independent rect. 15 18
866 61.16 humidity 60.0 270 > th dose independent rect. 18 8
873 61.19 atmosphere 1015.0 270 < th dose independent rect. 11 10
881 61.21 atmosphere 1005.0 270 > th dose independent rect. 3 2
884 61.21 temperature 30.0 270 < th dose independent rect. 18 8
886 61.21 temperature 10.0 270 > th dose independent rect. 21 14
887 61.21 atmosphere 995.0 270 > th dose independent rect. 21 14
900 61.22 radiation 40.0 90 < th dose dependent rect. 3 8
908 61.25 radiation 40.0 90 < th dose independent rect. 3 16
909 61.25 radiation 40.0 10 < th dose independent rect. 4 16
910 61.25 temperature 15.0 270 > th dose independent rect. 2 17
915 61.26 atmosphere 1015.0 10 < th dose independent rect. 9 19
917 61.28 wind 9.0 270 < th dose independent rect. 19 7
918 61.28 temperature 10.0 270 > th dose independent rect. 19 7
929 61.28 atmosphere 1015.0 270 < th dose independent rect. 2 17
959 61.32 wind 9.0 270 < th dose independent rect. 21 14
969 61.33 radiation 1.0 270 < th dose dependent rect. 3 9
987 61.38 humidity 50.0 270 > th dose independent rect. 9 1
996 61.39 radiation 40.0 90 < th dose dependent rect. 15 17