Os01g0510200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0510200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 363.43 | 0.896 | 6.42 | -2.89 | 0.624 | 1.07 | 0.0237 | -0.275 | 0.187 | 1.2 | 1.196 | 3881 | -- | -- |
| 363.47 | 0.888 | 6.42 | -2.91 | 0.625 | 1.08 | 0.0443 | -- | 0.191 | 1.13 | 1.229 | 3809 | -- | -- |
| 363.4 | 0.888 | 6.42 | -2.9 | 0.625 | 1.08 | -- | -0.229 | 0.188 | 1.12 | 1.2 | 3812 | -- | -- |
| 363.48 | 0.888 | 6.42 | -2.91 | 0.625 | 1.08 | -- | -- | 0.189 | 1.13 | 1.228 | 3809 | -- | -- |
| 386.25 | 0.915 | 6.42 | -2.89 | -- | 1.1 | -- | -0.43 | 0.221 | -- | 1.435 | 4095 | -- | -- |
| 383.24 | 0.918 | 6.47 | -2.58 | 0.577 | -- | 0.0542 | -- | -0.0759 | 1.65 | -- | -- | -- | -- |
| 383.26 | 0.917 | 6.47 | -2.59 | 0.577 | -- | -- | -- | -0.0762 | 1.65 | -- | -- | -- | -- |
| 386.32 | 0.915 | 6.42 | -2.9 | -- | 1.07 | -- | -- | 0.214 | -- | 1.5 | 4120 | -- | -- |
| 533.72 | 1.08 | 6.43 | -- | 0.517 | -1.53 | -- | -- | 0.0943 | 0.813 | 11.76 | 8730 | -- | -- |
| 403.58 | 0.939 | 6.47 | -2.56 | -- | -- | -- | -- | -0.0634 | -- | -- | -- | -- | -- |
| 559.6 | 1.11 | 6.41 | -- | 0.531 | -- | -- | -- | 0.212 | 1.5 | -- | -- | -- | -- |
| 500.45 | 1.04 | 6.34 | -- | -- | -1.92 | -- | -- | 0.48 | -- | 14.44 | 46996 | -- | -- |
| 576.9 | 1.12 | 6.4 | -- | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 352.54 | wind | 1 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 3 | 352.69 | wind | 1 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 6 | 353.17 | wind | 1 | 4320 | > th | dose independent | rect. | 5 | 4 |
| 17 | 355.37 | wind | 1 | 4320 | < th | dose dependent | rect. | 2 | 7 |
| 40 | 357.65 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 2 |
| 51 | 358.61 | wind | 1 | 4320 | < th | dose dependent | rect. | 4 | 11 |
| 58 | 358.96 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 5 |
| 67 | 359.21 | wind | 1 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 73 | 359.53 | wind | 1 | 4320 | < th | dose dependent | rect. | 2 | 13 |
| 87 | 359.93 | wind | 1 | 4320 | < th | dose dependent | rect. | 2 | 16 |
| 106 | 360.68 | radiation | 40 | 270 | < th | dose independent | rect. | 4 | 14 |
| 126 | 361.40 | wind | 1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 150 | 361.97 | wind | 5 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 151 | 361.98 | wind | 1 | 4320 | > th | dose independent | sin | 5 | NA |
| 154 | 361.99 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 155 | 361.99 | wind | 1 | 4320 | < th | dose independent | rect. | 2 | 13 |
| 162 | 362.06 | wind | 7 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 173 | 362.22 | wind | 1 | 4320 | < th | dose independent | rect. | 2 | 16 |
| 175 | 362.25 | wind | 1 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 181 | 362.37 | wind | 1 | 4320 | > th | dose independent | rect. | 2 | 16 |
| 183 | 362.41 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 186 | 362.50 | wind | 1 | 4320 | < th | dose independent | sin | 5 | NA |
| 209 | 362.72 | wind | 1 | 4320 | > th | dose independent | rect. | 2 | 19 |
| 225 | 362.87 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 228 | 362.91 | wind | 5 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 234 | 362.97 | wind | 5 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 238 | 363.01 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 239 | 363.01 | radiation | 20 | 90 | < th | dose independent | rect. | 5 | 15 |
| 240 | 363.02 | wind | 1 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 250 | 363.11 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 251 | 363.12 | wind | 5 | 14400 | > th | dose independent | rect. | 8 | 16 |
| 254 | 363.14 | wind | 5 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 256 | 363.15 | wind | 1 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 261 | 363.21 | wind | 1 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 263 | 363.21 | wind | 3 | 14400 | > th | dose dependent | rect. | 8 | 16 |
| 273 | 363.30 | wind | 5 | 14400 | < th | dose independent | rect. | 9 | 6 |
| 281 | 363.33 | wind | 3 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 302 | 363.42 | wind | 5 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 323 | 363.48 | temperature | 15 | 30 | > th | dose dependent | rect. | 17 | 15 |
| 335 | 363.53 | wind | 1 | 4320 | > th | dose independent | rect. | 4 | 16 |
| 362 | 363.59 | wind | 5 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 363 | 363.59 | wind | 7 | 14400 | < th | dose dependent | rect. | 8 | 7 |
| 367 | 363.62 | wind | 5 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 420 | 363.76 | radiation | 40 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 455 | 363.88 | wind | 5 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 465 | 363.92 | wind | 1 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 469 | 363.93 | wind | 7 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 512 | 364.05 | wind | 5 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 542 | 364.13 | wind | 1 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 547 | 364.14 | wind | 5 | 14400 | < th | dose independent | sin | 23 | NA |
| 555 | 364.16 | radiation | 40 | 90 | < th | dose independent | rect. | 22 | 23 |
| 563 | 364.19 | radiation | 1 | 270 | > th | dose dependent | rect. | 8 | 6 |
| 584 | 364.24 | wind | 5 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 589 | 364.25 | wind | 1 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 593 | 364.26 | radiation | 1 | 270 | < th | dose independent | rect. | 14 | 14 |
| 598 | 364.27 | wind | 5 | 14400 | > th | dose independent | sin | 23 | NA |
| 608 | 364.29 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 611 | 364.29 | wind | 5 | 14400 | < th | dose independent | rect. | 10 | 21 |
| 614 | 364.30 | radiation | 1 | 270 | < th | dose dependent | rect. | 14 | 14 |
| 615 | 364.31 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 633 | 364.35 | radiation | 20 | 90 | < th | dose independent | rect. | 22 | 23 |
| 642 | 364.37 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 647 | 364.37 | wind | 9 | 14400 | < th | dose dependent | rect. | 9 | 20 |
| 652 | 364.38 | radiation | 10 | 30 | < th | dose dependent | rect. | 21 | 11 |
| 682 | 364.43 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 712 | 364.46 | radiation | 40 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 743 | 364.52 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 748 | 364.52 | wind | 3 | 14400 | > th | dose dependent | sin | 0 | NA |
| 766 | 364.55 | radiation | 40 | 270 | < th | dose independent | rect. | 9 | 23 |
| 767 | 364.55 | wind | 1 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 776 | 364.57 | temperature | 25 | 30 | > th | dose independent | rect. | 8 | 9 |
| 778 | 364.58 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 15 |
| 782 | 364.58 | wind | 3 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 789 | 364.59 | wind | 3 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 799 | 364.61 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 821 | 364.64 | wind | 5 | 14400 | < th | dose independent | no | NA | NA |
| 836 | 364.67 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 854 | 364.71 | radiation | 40 | 10 | < th | dose dependent | rect. | 9 | 12 |
| 873 | 364.76 | wind | 9 | 14400 | < th | dose dependent | rect. | 8 | 17 |
| 881 | 364.77 | wind | 5 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 902 | 364.81 | wind | 3 | 14400 | > th | dose dependent | no | NA | NA |
| 924 | 364.85 | wind | 5 | 14400 | > th | dose independent | no | NA | NA |
| 976 | 364.94 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 977 | 364.94 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 8 |
| 982 | 364.95 | radiation | 40 | 10 | < th | dose dependent | rect. | 11 | 10 |
| 986 | 364.96 | wind | 5 | 14400 | > th | dose independent | rect. | 22 | 23 |