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Os01g0499300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mov34/MPN/PAD-1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.013) R2 : 0.039
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.118 (0.0274) R2dN8 : 0.0504 R2N8 : 0.039
σ : 0.245
deviance : 27.58
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
10.63 0.153 10.7 0.743 0.432 0.137 -0.104 -0.982 0.29 2.46 22.94 1937 -- --
11.93 0.161 10.7 0.573 0.432 0.346 -0.0963 -- 0.224 2.51 18.49 9606 -- --
10.63 0.152 10.7 0.732 0.429 0.144 -- -0.954 0.286 2.46 22.8 1664 -- --
11.75 0.16 10.7 0.692 0.417 0.387 -- -- 0.247 2.52 16.2 41015 -- --
21.37 0.216 10.7 0.541 -- 0.166 -- -0.393 0.249 -- 22.8 1705 -- --
13.35 0.171 10.7 0.335 0.43 -- -0.0996 -- 0.146 2.54 -- -- -- --
13.38 0.171 10.7 0.337 0.43 -- -- -- 0.147 2.52 -- -- -- --
17.4 0.194 10.7 0.504 -- 0.27 -- -- 0.264 -- 26.7 25 -- --
12.49 0.165 10.8 -- 0.428 -0.269 -- -- 0.0689 2.56 33.6 47520 -- --
24.25 0.23 10.7 0.355 -- -- -- -- 0.157 -- -- -- -- --
16.38 0.189 10.7 -- 0.437 -- -- -- 0.109 2.53 -- -- -- --
21.35 0.215 10.7 -- -- 0.259 -- -- 0.156 -- 26.9 26 -- --
27.58 0.245 10.7 -- -- -- -- -- 0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.41 temperature 20 90 > th dose dependent rect. 19 23
2 10.54 radiation 1 14400 > th dose independent rect. 18 1
14 10.62 temperature 10 30 > th dose dependent sin 0 NA
20 10.64 temperature 20 1440 > th dose dependent rect. 16 6
23 10.65 radiation 1 43200 < th dose independent rect. 18 11
26 10.65 temperature 30 270 < th dose dependent rect. 22 22
28 10.66 temperature 20 1440 > th dose dependent rect. 17 4
32 10.66 temperature 30 270 < th dose dependent rect. 1 16
46 10.69 radiation 1 43200 < th dose independent rect. 18 1
61 10.69 temperature 20 1440 > th dose dependent rect. 14 15
65 10.70 wind 5 43200 > th dose independent rect. 23 3
67 10.70 temperature 20 1440 > th dose dependent sin 15 NA
69 10.70 temperature 30 30 < th dose dependent sin 0 NA
84 10.71 wind 3 43200 < th dose dependent rect. 20 1
92 10.72 wind 5 43200 < th dose independent rect. 23 4
98 10.72 radiation 1 43200 < th dose dependent rect. 4 1
116 10.73 radiation 1 43200 < th dose dependent rect. 19 10
120 10.73 temperature 20 90 > th dose dependent rect. 5 23
121 10.74 wind 5 43200 > th dose independent rect. 1 1
124 10.74 temperature 20 90 > th dose dependent no NA NA
133 10.74 temperature 20 10 > th dose dependent rect. 6 12
138 10.75 wind 1 43200 > th dose independent rect. 19 1
144 10.75 temperature 20 10 > th dose dependent rect. 1 17
149 10.76 wind 5 43200 < th dose independent rect. 1 1
150 10.76 wind 1 43200 < th dose independent rect. 19 1
162 10.77 temperature 25 4320 < th dose independent rect. 11 1
164 10.77 humidity 80 43200 < th dose independent rect. 4 5
166 10.77 humidity 80 43200 < th dose independent rect. 3 7
170 10.77 wind 5 43200 > th dose dependent rect. 22 6
177 10.78 atmosphere 1005 43200 > th dose independent rect. 9 1
178 10.78 atmosphere 1005 43200 < th dose independent rect. 9 1
197 10.79 humidity 80 43200 < th dose dependent rect. 19 1
213 10.79 temperature 20 90 > th dose dependent rect. 23 23
215 10.80 temperature 25 4320 > th dose independent rect. 11 1
218 10.80 radiation 1 43200 > th dose independent rect. 14 2
220 10.80 radiation 1 43200 < th dose independent rect. 14 2
231 10.80 humidity 90 14400 > th dose independent rect. 19 10
237 10.80 humidity 80 43200 < th dose dependent rect. 18 4
241 10.80 humidity 90 14400 > th dose dependent rect. 19 11
273 10.82 humidity 80 43200 > th dose independent rect. 4 5
299 10.83 wind 7 43200 < th dose independent rect. 21 8
323 10.84 humidity 90 14400 > th dose independent rect. 23 1
324 10.84 humidity 50 43200 < th dose independent rect. 14 1
353 10.85 humidity 50 43200 < th dose independent rect. 16 5
381 10.86 humidity 60 43200 > th dose independent rect. 9 1
384 10.86 humidity 70 43200 > th dose independent rect. 18 4
393 10.86 humidity 80 43200 < th dose independent rect. 19 15
413 10.87 humidity 60 43200 < th dose independent rect. 9 1
414 10.87 humidity 50 43200 < th dose independent rect. 16 1
420 10.87 humidity 50 43200 > th dose independent rect. 16 6
422 10.87 temperature 25 1440 < th dose independent rect. 15 7
433 10.87 humidity 90 14400 > th dose dependent sin 10 NA
435 10.87 wind 5 43200 > th dose dependent rect. 1 2
436 10.87 humidity 90 43200 > th dose dependent rect. 11 2
448 10.87 humidity 80 43200 < th dose dependent rect. 18 16
457 10.87 temperature 20 90 > th dose dependent rect. 8 23
459 10.88 humidity 50 43200 > th dose independent rect. 14 1
478 10.88 humidity 90 14400 > th dose dependent rect. 23 10
485 10.88 temperature 20 270 > th dose dependent rect. 17 22
491 10.89 humidity 90 43200 > th dose independent rect. 11 2
509 10.89 humidity 80 43200 > th dose independent rect. 19 14
543 10.90 temperature 25 1440 < th dose independent rect. 16 5
555 10.90 humidity 70 43200 > th dose independent rect. 18 17
560 10.90 temperature 20 1440 > th dose dependent no NA NA
563 10.90 radiation 1 43200 < th dose dependent rect. 15 1
594 10.90 temperature 20 1440 > th dose dependent rect. 1 23
599 10.91 wind 9 43200 > th dose independent rect. 21 2
601 10.91 wind 9 43200 < th dose independent rect. 21 2
633 10.91 radiation 1 43200 < th dose dependent rect. 8 10
640 10.91 temperature 30 10 < th dose dependent rect. 4 16
658 10.91 temperature 20 1440 > th dose dependent rect. 23 23
680 10.92 temperature 25 1440 > th dose independent rect. 15 7
697 10.92 humidity 90 14400 > th dose dependent rect. 23 3
703 10.92 radiation 1 43200 < th dose dependent rect. 5 11
731 10.92 temperature 20 1440 > th dose dependent rect. 19 23
735 10.93 atmosphere 995 43200 > th dose independent rect. 6 2
745 10.93 atmosphere 995 43200 > th dose independent rect. 5 5
779 10.93 humidity 70 43200 < th dose independent rect. 18 19
788 10.93 temperature 15 43200 > th dose dependent rect. 23 1
790 10.93 humidity 90 43200 > th dose dependent rect. 11 4
829 10.94 wind 1 43200 > th dose independent rect. 24 1
842 10.94 atmosphere 995 43200 < th dose independent rect. 5 5
850 10.94 atmosphere 995 43200 < th dose independent rect. 4 8
859 10.94 atmosphere 995 43200 < th dose independent rect. 3 11
872 10.94 atmosphere 995 43200 < th dose dependent rect. 5 3
880 10.94 radiation 1 43200 < th dose dependent rect. 5 6
886 10.94 atmosphere 995 43200 < th dose dependent rect. 2 9
889 10.94 temperature 15 270 > th dose dependent rect. 5 10
890 10.94 atmosphere 995 43200 < th dose dependent rect. 1 11
950 10.95 humidity 50 43200 > th dose independent rect. 16 1
962 10.95 humidity 70 43200 < th dose independent rect. 18 5
986 10.95 radiation 1 43200 > th dose independent rect. 6 10
989 10.95 radiation 1 43200 < th dose independent rect. 6 11