Os01g0392100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0392100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.09 | 0.262 | 9.85 | 0.348 | 0.329 | 0.934 | 0.511 | 0.309 | -0.398 | 10.8 | 24.32 | 299 | -- | -- |
| 31.29 | 0.261 | 9.85 | 0.38 | 0.336 | 0.95 | 0.463 | -- | -0.397 | 10.8 | 24.2 | 298 | -- | -- |
| 32.19 | 0.264 | 9.85 | 0.357 | 0.327 | 0.945 | -- | 0.317 | -0.401 | 10.8 | 24.22 | 300 | -- | -- |
| 32.3 | 0.265 | 9.84 | 0.405 | 0.345 | 0.959 | -- | -- | -0.382 | 10.9 | 24.21 | 294 | -- | -- |
| 35.99 | 0.279 | 9.86 | 0.333 | -- | 0.908 | -- | 0.48 | -0.376 | -- | 26.55 | 569 | -- | -- |
| 42.54 | 0.306 | 9.88 | 0.168 | 0.323 | -- | 0.511 | -- | -0.55 | 9.79 | -- | -- | -- | -- |
| 43.53 | 0.309 | 9.88 | 0.187 | 0.321 | -- | -- | -- | -0.549 | 9.7 | -- | -- | -- | -- |
| 36.29 | 0.281 | 9.85 | 0.43 | -- | 0.884 | -- | -- | -0.358 | -- | 27.7 | 632 | -- | -- |
| 36.84 | 0.283 | 9.87 | -- | 0.334 | 0.888 | -- | -- | -0.436 | 10.3 | 24.28 | 317 | -- | -- |
| 49.65 | 0.329 | 9.89 | 0.184 | -- | -- | -- | -- | -0.549 | -- | -- | -- | -- | -- |
| 44.46 | 0.312 | 9.89 | -- | 0.321 | -- | -- | -- | -0.57 | 9.65 | -- | -- | -- | -- |
| 40.57 | 0.297 | 9.86 | -- | -- | 0.73 | -- | -- | -0.43 | -- | 26.7 | 537 | -- | -- |
| 50.55 | 0.332 | 9.9 | -- | -- | -- | -- | -- | -0.569 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.82 | wind | 7 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 2 | 29.85 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 15 | 30.16 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 23 | 30.40 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 17 |
| 45 | 30.90 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 51 | 30.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 8 |
| 55 | 31.01 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 59 | 31.03 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 20 |
| 62 | 31.06 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 17 |
| 70 | 31.12 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 21 |
| 71 | 31.13 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 18 |
| 85 | 31.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 88 | 31.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 22 |
| 106 | 31.31 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 17 |
| 119 | 31.37 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 8 |
| 154 | 31.51 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 156 | 31.52 | temperature | 25 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 160 | 31.55 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 6 |
| 186 | 31.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 189 | 31.67 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 191 | 31.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 213 | 31.74 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 228 | 31.75 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 230 | 31.75 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 231 | 31.76 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 232 | 31.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 14 |
| 236 | 31.78 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 252 | 31.83 | temperature | 20 | 270 | > th | dose independent | rect. | 24 | 4 |
| 254 | 31.83 | radiation | 40 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 258 | 31.84 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 265 | 31.87 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 286 | 31.89 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 372 | 32.22 | wind | 5 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 378 | 32.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 406 | 32.27 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 418 | 32.29 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 434 | 32.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 475 | 32.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 483 | 32.41 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 485 | 32.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 11 |
| 494 | 32.43 | wind | 1 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 508 | 32.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 517 | 32.46 | wind | 1 | 14400 | > th | dose independent | sin | 13 | NA |
| 518 | 32.46 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 527 | 32.47 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 542 | 32.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 11 |
| 567 | 32.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 594 | 32.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 597 | 32.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 602 | 32.54 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 609 | 32.55 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 621 | 32.56 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 691 | 32.60 | temperature | 25 | 270 | < th | dose dependent | sin | 19 | NA |
| 703 | 32.61 | wind | 1 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 713 | 32.62 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 772 | 32.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 773 | 32.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 845 | 32.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 850 | 32.71 | wind | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 884 | 32.73 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 971 | 32.77 | temperature | 20 | 10 | > th | dose independent | rect. | 2 | 4 |