Os01g0385900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os01g0385900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.11 | 0.687 | 6.94 | -2.13 | 0.349 | 0.825 | -0.0372 | 0.453 | 0.472 | 14.6 | 29.3 | 4964 | -- | -- |
| 213.25 | 0.68 | 6.92 | -2.02 | 0.319 | 0.929 | 0.172 | -- | 0.538 | 13.5 | 28.91 | 4282 | -- | -- |
| 213.46 | 0.68 | 6.92 | -2.16 | 0.311 | 0.862 | -- | 0.509 | 0.514 | 14.1 | 29.1 | 4282 | -- | -- |
| 213.11 | 0.68 | 6.92 | -2.02 | 0.313 | 0.934 | -- | -- | 0.537 | 13.8 | 28.9 | 4254 | -- | -- |
| 217.65 | 0.687 | 6.92 | -2.08 | -- | 0.951 | -- | 0.509 | 0.532 | -- | 28.3 | 4115 | -- | -- |
| 242.3 | 0.73 | 6.92 | -2.29 | 0.383 | -- | 0.243 | -- | 0.512 | 13.5 | -- | -- | -- | -- |
| 242.49 | 0.729 | 6.92 | -2.28 | 0.386 | -- | -- | -- | 0.514 | 13.7 | -- | -- | -- | -- |
| 217.76 | 0.687 | 6.92 | -1.98 | -- | 0.97 | -- | -- | 0.55 | -- | 28.22 | 4114 | -- | -- |
| 214.05 | 0.681 | 6.71 | -- | 0.334 | 1.91 | -- | -- | 1.37 | 14 | 21 | 47409 | -- | -- |
| 251.54 | 0.741 | 6.92 | -2.29 | -- | -- | -- | -- | 0.505 | -- | -- | -- | -- | -- |
| 379.13 | 0.911 | 6.86 | -- | 0.428 | -- | -- | -- | 0.767 | 13.9 | -- | -- | -- | -- |
| 220.96 | 0.692 | 6.72 | -- | -- | 1.93 | -- | -- | 1.4 | -- | 21.19 | 47520 | -- | -- |
| 390.19 | 0.922 | 6.86 | -- | -- | -- | -- | -- | 0.76 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.06 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 2 | 204.81 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 19 | 205.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 20 | 205.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 23 | 206.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 24 | 206.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 25 | 206.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 26 | 206.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 27 | 206.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 30 | 206.71 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 45 | 206.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 48 | 206.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 52 | 206.99 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 8 |
| 54 | 207.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 58 | 207.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 60 | 207.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 4 |
| 65 | 207.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 70 | 207.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 71 | 207.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 74 | 207.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 78 | 207.22 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 90 | 207.24 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 91 | 207.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 98 | 207.37 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 99 | 207.37 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 17 |
| 105 | 207.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 106 | 207.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 17 |
| 111 | 207.48 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 115 | 207.49 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 116 | 207.49 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 118 | 207.49 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 121 | 207.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 122 | 207.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 123 | 207.55 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 23 | 11 |
| 129 | 207.58 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 152 | 207.62 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 10 |
| 153 | 207.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 158 | 207.69 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 3 | NA |
| 159 | 207.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 14 |
| 163 | 207.76 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 172 | 207.86 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 173 | 207.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 175 | 207.86 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 181 | 207.89 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 203 | 208.06 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 222 | 208.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 223 | 208.19 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 8 | NA |
| 225 | 208.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 227 | 208.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 228 | 208.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 12 |
| 241 | 208.29 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 10 |
| 256 | 208.32 | radiation | 40.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 268 | 208.39 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 14 |
| 317 | 208.63 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 3 | NA |
| 319 | 208.63 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 3 | NA |
| 323 | 208.66 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 3 | NA |
| 327 | 208.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 362 | 208.76 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 367 | 208.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 18 |
| 396 | 208.85 | radiation | 30.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 414 | 208.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 416 | 208.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 427 | 208.95 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 428 | 208.95 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 431 | 208.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 470 | 208.97 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 472 | 208.98 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 491 | 209.01 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 8 |
| 518 | 209.07 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 547 | 209.12 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 8 | NA |
| 550 | 209.12 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 8 | NA |
| 559 | 209.14 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 8 | NA |
| 587 | 209.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 600 | 209.25 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 604 | 209.27 | radiation | 1.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 636 | 209.31 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 640 | 209.32 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 642 | 209.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 21 |
| 657 | 209.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 21 |
| 659 | 209.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 21 |
| 672 | 209.39 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 19 |
| 674 | 209.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 19 |
| 676 | 209.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 19 |
| 682 | 209.45 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 705 | 209.52 | radiation | 1.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 753 | 209.63 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 756 | 209.63 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 17 |
| 776 | 209.68 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 779 | 209.69 | radiation | 40.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 820 | 209.79 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 884 | 209.89 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 891 | 209.90 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 910 | 209.94 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 920 | 209.97 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 933 | 210.00 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 935 | 210.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 938 | 210.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 960 | 210.05 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 961 | 210.05 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 983 | 210.08 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 13 |
| 996 | 210.10 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 8 | 4 |