FiT-DB / Search/ Help/ Sample detail

Os01g0377700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ubiquitin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0167) R2 : 0.0142
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0899 (0.0351) R2dN8 : 0.0183 R2N8 : 0.0142
σ : 0.314
deviance : 45.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.43 0.246 11 0.00565 0.347 -1.72 0.182 8.6 -0.0115 11.3 1000 271 -- --
28.39 0.25 10.9 0.554 0.341 -0.31 0.165 -- -0.0173 11.3 996.6 156 -- --
27.44 0.244 11 -0.0246 0.357 -1.77 -- 8.8 -0.0126 11.2 1000 306 -- --
28.32 0.248 10.9 0.55 0.335 -0.263 -- -- -0.0134 11.2 998.3 201 -- --
34.94 0.275 11 0.0782 -- -1.68 -- 8.24 -0.0154 -- 999.4 225 -- --
29.32 0.254 10.9 0.571 0.34 -- 0.162 -- -0.0242 11.3 -- -- -- --
29.43 0.254 10.9 0.577 0.339 -- -- -- -0.0237 11.2 -- -- -- --
35.34 0.277 10.9 0.538 -- -0.283 -- -- -0.0147 -- 998.3 199 -- --
36.05 0.28 10.9 -- 0.337 -0.284 -- -- -0.0688 10.9 1000 186 -- --
36.62 0.283 10.9 0.569 -- -- -- -- -0.0268 -- -- -- -- --
38.2 0.289 10.9 -- 0.334 -- -- -- -0.088 11.1 -- -- -- --
42.86 0.305 10.9 -- -- -0.307 -- -- -0.0703 -- 999.6 83 -- --
45.15 0.314 10.9 -- -- -- -- -- -0.0899 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.82 wind 1.0 14400 < th dose dependent rect. 2 1
2 25.98 wind 1.0 14400 < th dose independent rect. 2 1
3 26.05 wind 1.0 14400 > th dose independent rect. 2 1
4 26.38 precipitation 0.1 720 < th dose independent rect. 12 19
5 26.38 humidity 90.0 720 < th dose dependent rect. 12 1
6 26.38 precipitation 0.1 720 < th dose dependent rect. 12 19
8 26.55 radiation 10.0 720 < th dose independent rect. 16 3
9 26.62 radiation 10.0 720 < th dose independent rect. 17 10
10 26.65 radiation 10.0 720 < th dose independent rect. 7 12
12 26.72 humidity 90.0 14400 > th dose dependent rect. 4 2
13 26.72 radiation 10.0 720 < th dose dependent rect. 6 13
24 26.79 radiation 10.0 720 > th dose dependent rect. 12 1
25 26.80 humidity 70.0 720 < th dose independent rect. 12 1
28 26.82 humidity 90.0 14400 < th dose independent rect. 2 4
29 26.82 atmosphere 1005.0 270 > th dose independent rect. 15 14
34 26.86 wind 1.0 14400 > th dose independent rect. 5 1
35 26.86 radiation 20.0 720 < th dose independent rect. 8 2
36 26.86 radiation 20.0 720 < th dose independent rect. 7 6
38 26.86 humidity 90.0 720 < th dose dependent rect. 12 3
40 26.87 radiation 30.0 720 < th dose dependent rect. 8 1
41 26.88 humidity 90.0 14400 < th dose independent rect. 24 6
45 26.89 radiation 40.0 720 < th dose dependent rect. 24 10
55 26.92 radiation 30.0 720 < th dose independent rect. 24 19
57 26.92 radiation 40.0 720 < th dose dependent rect. 24 19
62 26.93 radiation 10.0 720 < th dose dependent rect. 24 19
64 26.94 radiation 30.0 720 < th dose independent rect. 24 13
65 26.95 humidity 90.0 14400 < th dose independent rect. 24 1
72 26.96 radiation 10.0 720 < th dose independent rect. 15 13
75 26.96 radiation 30.0 720 < th dose dependent rect. 7 3
76 26.96 radiation 30.0 720 < th dose dependent rect. 7 6
77 26.96 radiation 40.0 720 < th dose dependent rect. 24 13
86 26.99 radiation 20.0 720 > th dose independent rect. 12 1
88 26.99 precipitation 0.1 720 < th dose independent rect. 3 14
89 26.99 precipitation 0.1 720 < th dose dependent rect. 3 14
92 27.00 precipitation 0.1 720 < th dose independent rect. 19 22
95 27.00 precipitation 0.1 720 < th dose dependent rect. 19 22
107 27.02 atmosphere 1000.0 30 > th dose independent rect. 24 23
112 27.03 precipitation 0.1 720 < th dose independent rect. 4 20
114 27.03 precipitation 0.1 720 < th dose dependent rect. 4 20
116 27.04 temperature 30.0 720 < th dose independent rect. 7 5
120 27.04 temperature 30.0 720 < th dose independent rect. 24 11
122 27.04 humidity 70.0 90 > th dose independent rect. 16 13
129 27.04 radiation 30.0 720 < th dose dependent rect. 16 3
132 27.05 atmosphere 1005.0 720 > th dose independent sin 15 NA
151 27.07 temperature 20.0 90 > th dose independent rect. 16 12
159 27.08 radiation 30.0 720 < th dose independent rect. 24 10
167 27.09 atmosphere 1005.0 270 > th dose independent sin 13 NA
182 27.10 radiation 30.0 720 < th dose independent rect. 15 14
183 27.10 precipitation 0.1 720 < th dose independent rect. 19 14
185 27.10 precipitation 0.1 720 < th dose dependent rect. 19 14
197 27.12 wind 1.0 14400 < th dose independent rect. 5 1
215 27.13 radiation 10.0 720 < th dose dependent rect. 17 2
220 27.14 precipitation 0.1 720 < th dose independent rect. 19 5
231 27.14 precipitation 0.1 720 < th dose dependent rect. 19 5
232 27.14 radiation 30.0 720 < th dose dependent rect. 16 11
233 27.14 humidity 50.0 720 > th dose dependent rect. 7 12
252 27.16 humidity 50.0 720 > th dose dependent rect. 24 19
259 27.17 atmosphere 1000.0 270 > th dose independent rect. 24 11
271 27.18 temperature 30.0 270 < th dose independent rect. 15 13
281 27.19 precipitation 0.1 720 < th dose independent rect. 12 10
288 27.19 precipitation 0.1 720 < th dose dependent rect. 12 10
329 27.22 atmosphere 1015.0 720 < th dose independent rect. 7 14
338 27.23 atmosphere 1000.0 720 > th dose independent rect. 24 1
350 27.23 precipitation 0.1 720 < th dose independent rect. 1 23
355 27.23 precipitation 0.1 720 < th dose dependent rect. 1 23
359 27.24 precipitation 0.1 270 < th dose independent rect. 19 12
366 27.24 precipitation 0.1 270 < th dose dependent rect. 19 12
367 27.25 atmosphere 1000.0 720 > th dose independent rect. 24 3
374 27.25 atmosphere 995.0 720 > th dose independent rect. 24 19
379 27.26 wind 1.0 14400 > th dose independent rect. 22 8
390 27.27 atmosphere 1005.0 10 > th dose independent rect. 24 6
393 27.27 humidity 70.0 720 > th dose independent rect. 24 13
397 27.27 atmosphere 1000.0 270 < th dose independent rect. 21 20
403 27.27 humidity 50.0 720 > th dose dependent rect. 7 7
425 27.28 humidity 50.0 90 > th dose dependent rect. 17 12
436 27.29 wind 1.0 30 > th dose independent rect. 23 10
456 27.30 humidity 90.0 14400 > th dose independent rect. 24 1
461 27.30 humidity 70.0 720 > th dose independent rect. 24 10
466 27.30 temperature 30.0 720 < th dose independent rect. 19 20
479 27.31 humidity 50.0 720 > th dose independent rect. 7 5
487 27.31 temperature 30.0 270 < th dose independent rect. 24 19
488 27.31 humidity 60.0 720 > th dose independent rect. 24 19
516 27.32 radiation 40.0 720 < th dose dependent rect. 15 13
519 27.33 humidity 90.0 14400 > th dose independent rect. 23 6
539 27.34 wind 9.0 720 < th dose independent rect. 19 5
540 27.34 temperature 10.0 720 > th dose independent rect. 7 5
541 27.34 atmosphere 995.0 720 > th dose independent rect. 7 5
542 27.34 atmosphere 1015.0 720 < th dose independent rect. 7 5
548 27.34 temperature 10.0 720 > th dose independent rect. 12 19
565 27.35 temperature 10.0 720 > th dose independent rect. 19 5
566 27.35 temperature 30.0 720 < th dose independent rect. 19 5
567 27.35 humidity 50.0 720 > th dose independent rect. 19 5
568 27.35 atmosphere 995.0 720 > th dose independent rect. 19 5
569 27.35 radiation 1.0 720 < th dose independent rect. 19 5
579 27.35 temperature 10.0 720 > th dose independent rect. 24 19
582 27.35 temperature 25.0 270 > th dose dependent sin 12 NA
583 27.35 humidity 50.0 14400 > th dose dependent rect. 5 1
588 27.35 radiation 1.0 720 < th dose dependent rect. 19 5
593 27.35 temperature 20.0 90 > th dose dependent rect. 16 11
600 27.35 radiation 10.0 720 < th dose dependent rect. 7 21
601 27.36 humidity 90.0 14400 > th dose independent rect. 4 1
604 27.36 atmosphere 1010.0 720 < th dose independent rect. 17 2
606 27.36 precipitation 0.1 720 < th dose independent rect. 7 5
607 27.36 precipitation 0.1 720 < th dose independent rect. 11 6
611 27.36 atmosphere 1005.0 1440 < th dose independent rect. 16 9
617 27.36 humidity 90.0 10 > th dose independent rect. 2 20
628 27.36 precipitation 0.1 720 < th dose dependent rect. 7 5
629 27.36 precipitation 0.1 720 < th dose dependent rect. 11 6
647 27.37 precipitation 0.1 720 < th dose independent rect. 21 10
648 27.37 temperature 30.0 270 < th dose independent rect. 8 11
654 27.37 humidity 60.0 720 > th dose independent rect. 24 17
667 27.37 precipitation 0.1 720 < th dose dependent rect. 21 10
687 27.38 radiation 10.0 90 < th dose independent rect. 8 21
691 27.38 radiation 1.0 90 < th dose independent rect. 24 23
698 27.39 atmosphere 1000.0 720 > th dose independent sin 6 NA
719 27.39 humidity 50.0 14400 > th dose dependent rect. 2 4
726 27.40 precipitation 0.1 270 < th dose independent sin 13 NA
727 27.40 humidity 60.0 720 < th dose independent rect. 12 3
732 27.40 wind 1.0 14400 < th dose independent rect. 22 8
739 27.40 atmosphere 1005.0 30 > th dose independent rect. 18 12
742 27.40 atmosphere 1000.0 720 > th dose independent rect. 23 13
755 27.40 precipitation 0.1 270 < th dose dependent sin 13 NA
764 27.40 humidity 50.0 10 > th dose dependent rect. 17 13
790 27.41 temperature 20.0 10 > th dose dependent rect. 17 10
812 27.42 radiation 20.0 4320 < th dose independent rect. 17 13
817 27.42 atmosphere 1000.0 270 < th dose independent rect. 10 22
838 27.42 radiation 1.0 90 < th dose dependent rect. 24 23
839 27.43 atmosphere 1000.0 270 > th dose independent no NA NA
841 27.43 atmosphere 1000.0 720 > th dose independent rect. 17 2
848 27.43 humidity 70.0 720 > th dose independent rect. 7 6
849 27.43 temperature 30.0 720 > th dose independent rect. 9 8
857 27.43 wind 1.0 720 > th dose independent rect. 12 12
861 27.43 wind 9.0 720 < th dose independent rect. 19 14
891 27.44 atmosphere 1000.0 270 < th dose independent no NA NA
895 27.44 temperature 30.0 720 > th dose independent rect. 9 6
905 27.44 precipitation 0.1 720 < th dose independent rect. 14 10
936 27.44 precipitation 0.1 720 < th dose dependent rect. 14 10
939 27.44 humidity 50.0 720 > th dose dependent rect. 24 14
945 27.45 radiation 20.0 720 < th dose independent sin 2 NA
952 27.45 wind 9.0 720 < th dose independent rect. 21 10
953 27.45 temperature 10.0 720 > th dose independent rect. 9 10
954 27.45 atmosphere 1015.0 720 < th dose independent rect. 9 10
955 27.45 radiation 20.0 720 < th dose independent rect. 21 10
958 27.45 atmosphere 995.0 270 > th dose independent rect. 7 12
959 27.45 atmosphere 1015.0 270 < th dose independent rect. 16 12
961 27.45 temperature 10.0 720 > th dose independent rect. 19 14
962 27.45 humidity 50.0 720 > th dose independent rect. 19 14
963 27.45 atmosphere 995.0 720 > th dose independent rect. 19 14
964 27.45 atmosphere 1005.0 270 < th dose independent rect. 13 15
987 27.45 humidity 70.0 10 > th dose dependent rect. 24 23
989 27.46 temperature 30.0 720 > th dose independent rect. 11 4