Os01g0367100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0367100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.48 | 0.259 | 10.1 | -0.129 | 0.398 | 0.885 | -0.149 | 1.49 | -0.256 | 22.9 | 22.62 | 945 | -- | -- |
| 31.44 | 0.261 | 10.1 | -0.479 | 0.417 | 0.974 | 0.0964 | -- | -0.347 | 22.4 | 23 | 1020 | -- | -- |
| 30.55 | 0.257 | 10.1 | -0.14 | 0.408 | 0.869 | -- | 1.34 | -0.259 | 22.6 | 22.72 | 976 | -- | -- |
| 31.47 | 0.261 | 10.1 | -0.484 | 0.41 | 0.975 | -- | -- | -0.351 | 22.5 | 23 | 1013 | -- | -- |
| 38.42 | 0.289 | 10.1 | -0.286 | -- | 1.16 | -- | 0.988 | -0.304 | -- | 23.24 | 898 | -- | -- |
| 57.58 | 0.356 | 10.1 | -0.188 | 0.646 | -- | 0.246 | -- | -0.182 | 22.7 | -- | -- | -- | -- |
| 57.83 | 0.356 | 10.1 | -0.198 | 0.645 | -- | -- | -- | -0.183 | 22.7 | -- | -- | -- | -- |
| 38.77 | 0.29 | 10.1 | -0.525 | -- | 1.24 | -- | -- | -0.367 | -- | 23.26 | 897 | -- | -- |
| 37.17 | 0.284 | 10.1 | -- | 0.431 | 0.855 | -- | -- | -0.275 | 22.5 | 23.22 | 1007 | -- | -- |
| 83.53 | 0.427 | 10.1 | -0.185 | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
| 58.87 | 0.359 | 10.1 | -- | 0.643 | -- | -- | -- | -0.161 | 22.7 | -- | -- | -- | -- |
| 45.43 | 0.314 | 10.1 | -- | -- | 1.13 | -- | -- | -0.272 | -- | 23.8 | 892 | -- | -- |
| 84.43 | 0.429 | 10.1 | -- | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 2 | 30.83 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 20 |
| 3 | 30.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 22 |
| 7 | 30.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 12 |
| 12 | 30.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 17 |
| 18 | 30.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 12 |
| 72 | 31.08 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 81 | 31.11 | temperature | 20 | 1440 | > th | dose dependent | sin | 23 | NA |
| 181 | 31.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 195 | 31.31 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 221 | 31.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 230 | 31.37 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 256 | 31.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 333 | 31.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 384 | 31.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 513 | 31.74 | temperature | 30 | 720 | < th | dose dependent | sin | 22 | NA |
| 543 | 31.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 698 | 31.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 755 | 32.02 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 899 | 32.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 964 | 32.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 982 | 32.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 5 |