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Os01g0363900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to HASTY.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.5 (0.0143) R2 : 0.628
β1 : 0.763 (0.0525) R2dD : 0.179 R2D : 0.119
β2 : 0.873 (0.0374) R2dC : 0.446 R2C : 0.407
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.267 (0.0306) R2dN8 : 0.083 R2N8 : 0.0133
σ : 0.27
deviance : 33.14
__
_____
C
peak time of C : 17.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.47 0.251 9.51 0.744 0.751 -0.554 0.187 -0.544 0.244 20.5 12.15 228 -- --
29.48 0.253 9.51 0.742 0.764 -0.54 -0.0809 -- 0.243 20.3 14.09 209 -- --
28.49 0.249 9.51 0.745 0.774 -0.565 -- -0.439 0.244 20.5 13.04 205 -- --
29.48 0.253 9.51 0.734 0.776 -0.56 -- -- 0.239 20.4 14.02 205 -- --
32.16 0.264 9.49 0.741 -- -1.04 -- -0.527 0.217 -- 6.328 689 -- --
32.44 0.267 9.5 0.766 0.869 -- 0.538 -- 0.265 17.6 -- -- -- --
33.14 0.27 9.5 0.763 0.873 -- -- -- 0.267 17.7 -- -- -- --
32.61 0.266 9.49 0.731 -- -1.06 -- -- 0.213 -- 6.709 695 -- --
43.67 0.308 9.53 -- 0.782 -0.536 -- -- 0.16 20.2 17.4 205 -- --
72.69 0.398 9.49 0.736 -- -- -- -- 0.246 -- -- -- -- --
48.49 0.326 9.52 -- 0.861 -- -- -- 0.182 17.7 -- -- -- --
46.15 0.316 9.51 -- -- -1.08 -- -- 0.134 -- 4.08 714 -- --
86.96 0.435 9.5 -- -- -- -- -- 0.164 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.90 temperature 10.0 270 > th dose dependent rect. 6 19
4 26.31 wind 7.0 270 < th dose independent rect. 6 10
7 26.33 temperature 10.0 10 > th dose dependent rect. 8 19
28 26.81 radiation 20.0 270 < th dose independent rect. 13 17
34 26.87 radiation 20.0 270 < th dose independent rect. 15 15
39 26.93 wind 7.0 270 < th dose independent rect. 5 22
41 26.94 radiation 40.0 270 < th dose dependent rect. 13 17
43 26.97 radiation 40.0 270 < th dose dependent rect. 15 15
50 27.03 radiation 10.0 270 < th dose dependent rect. 24 22
53 27.07 temperature 30.0 270 < th dose dependent rect. 23 1
69 27.15 temperature 15.0 270 > th dose independent rect. 16 14
70 27.15 temperature 30.0 90 < th dose dependent rect. 22 5
85 27.26 temperature 30.0 10 < th dose dependent rect. 23 5
86 27.26 wind 9.0 270 < th dose dependent rect. 6 10
106 27.39 wind 5.0 270 < th dose independent rect. 23 1
108 27.39 atmosphere 995.0 270 > th dose dependent rect. 23 1
113 27.41 atmosphere 995.0 10 > th dose dependent rect. 23 5
115 27.42 humidity 60.0 270 > th dose dependent rect. 23 1
119 27.43 temperature 30.0 10 < th dose dependent rect. 4 19
121 27.44 temperature 15.0 270 > th dose independent rect. 6 10
130 27.46 temperature 10.0 270 > th dose dependent rect. 6 9
141 27.50 radiation 30.0 10 < th dose dependent rect. 4 19
143 27.51 wind 7.0 90 < th dose independent rect. 8 19
176 27.61 humidity 50.0 10 > th dose dependent rect. 4 19
199 27.67 atmosphere 995.0 270 > th dose independent rect. 16 14
211 27.70 temperature 20.0 270 > th dose independent rect. 6 19
215 27.71 radiation 10.0 10 < th dose independent rect. 4 19
229 27.73 radiation 10.0 270 < th dose independent rect. 24 21
233 27.73 wind 9.0 270 < th dose dependent rect. 6 20
235 27.75 wind 5.0 90 < th dose independent rect. 22 5
236 27.75 precipitation 0.1 270 < th dose independent rect. 6 10
239 27.75 humidity 60.0 90 > th dose dependent rect. 22 5
240 27.75 precipitation 0.1 270 < th dose dependent rect. 6 10
251 27.78 wind 7.0 270 < th dose independent rect. 21 14
268 27.80 wind 5.0 270 < th dose independent rect. 21 16
269 27.80 radiation 10.0 270 < th dose independent rect. 1 19
282 27.81 radiation 30.0 270 < th dose dependent rect. 1 13
284 27.82 precipitation 0.1 270 < th dose independent rect. 23 1
285 27.82 precipitation 0.1 270 < th dose dependent rect. 23 1
286 27.82 wind 9.0 90 < th dose dependent rect. 8 19
288 27.83 temperature 10.0 270 > th dose independent rect. 23 1
289 27.83 temperature 30.0 270 < th dose independent rect. 23 1
290 27.83 humidity 50.0 270 > th dose independent rect. 23 1
293 27.83 atmosphere 995.0 270 > th dose independent rect. 23 1
294 27.83 radiation 1.0 270 < th dose independent rect. 23 1
299 27.83 wind 7.0 10 < th dose independent rect. 8 20
301 27.83 temperature 10.0 270 > th dose independent rect. 24 23
302 27.83 wind 9.0 270 < th dose dependent rect. 23 1
303 27.83 radiation 1.0 270 < th dose dependent rect. 23 1
323 27.86 atmosphere 1015.0 270 < th dose independent rect. 6 10
368 27.91 wind 1.0 30 > th dose independent rect. 23 5
418 27.95 temperature 25.0 10 < th dose dependent rect. 13 19
425 27.96 temperature 30.0 30 < th dose independent rect. 4 19
426 27.96 humidity 50.0 10 > th dose dependent rect. 23 5
427 27.96 radiation 30.0 270 < th dose dependent rect. 1 9
435 27.97 precipitation 0.1 270 < th dose independent rect. 16 14
438 27.97 precipitation 0.1 270 < th dose dependent rect. 16 14
441 27.97 temperature 25.0 10 < th dose dependent rect. 13 17
458 27.99 atmosphere 995.0 10 > th dose independent rect. 4 19
482 28.01 radiation 10.0 270 < th dose independent rect. 9 21
493 28.02 atmosphere 995.0 90 > th dose independent rect. 3 19
504 28.03 precipitation 0.1 270 < th dose independent rect. 3 2
506 28.03 wind 9.0 270 < th dose independent rect. 16 14
510 28.03 precipitation 0.1 270 < th dose dependent rect. 3 2
538 28.05 atmosphere 1015.0 270 < th dose independent rect. 24 22
563 28.07 temperature 10.0 10 > th dose independent rect. 23 5
564 28.07 temperature 30.0 10 < th dose independent rect. 23 5
565 28.07 humidity 50.0 10 > th dose independent rect. 23 5
568 28.07 atmosphere 995.0 10 > th dose independent rect. 23 5
569 28.07 radiation 1.0 10 < th dose independent rect. 23 5
574 28.07 temperature 10.0 10 > th dose independent rect. 4 19
576 28.07 atmosphere 1015.0 10 < th dose independent rect. 4 19
577 28.07 atmosphere 995.0 270 > th dose independent rect. 1 20
580 28.07 atmosphere 995.0 270 > th dose independent rect. 24 22
581 28.07 radiation 1.0 10 < th dose dependent rect. 23 5
598 28.08 wind 9.0 90 < th dose dependent rect. 22 5
615 28.09 radiation 40.0 270 < th dose independent rect. 10 21
657 28.11 temperature 10.0 90 > th dose independent rect. 22 5
658 28.11 temperature 30.0 90 < th dose independent rect. 22 5
659 28.11 humidity 50.0 90 > th dose independent rect. 22 5
662 28.11 atmosphere 995.0 90 > th dose independent rect. 22 5
663 28.11 radiation 1.0 90 < th dose independent rect. 22 5
669 28.11 temperature 10.0 90 > th dose independent rect. 3 19
670 28.11 atmosphere 1015.0 90 < th dose independent rect. 3 19
671 28.11 atmosphere 1015.0 270 < th dose independent rect. 1 20
676 28.11 radiation 1.0 90 < th dose dependent rect. 22 5
696 28.12 precipitation 0.1 90 < th dose independent rect. 22 5
697 28.12 radiation 1.0 270 > th dose independent rect. 6 10
698 28.12 humidity 50.0 270 > th dose independent rect. 16 14
710 28.12 precipitation 0.1 90 < th dose dependent rect. 22 5
745 28.15 radiation 10.0 30 > th dose independent rect. 8 10
757 28.15 precipitation 0.1 10 < th dose independent rect. 4 19
765 28.15 precipitation 0.1 10 < th dose dependent rect. 4 19
774 28.16 radiation 10.0 14400 < th dose dependent rect. 24 4
776 28.16 temperature 15.0 10 > th dose dependent rect. 8 8
787 28.17 wind 1.0 270 > th dose independent rect. 11 10
788 28.17 radiation 40.0 30 < th dose independent rect. 4 19
789 28.17 precipitation 0.1 90 < th dose independent rect. 3 19
795 28.17 precipitation 0.1 90 < th dose dependent rect. 3 19
824 28.20 atmosphere 1010.0 270 < th dose independent rect. 16 14
863 28.22 humidity 50.0 30 > th dose independent rect. 4 19
866 28.22 atmosphere 1015.0 270 < th dose dependent rect. 3 2
878 28.23 temperature 15.0 270 > th dose independent rect. 5 22
879 28.23 radiation 10.0 270 < th dose dependent sin 2 NA
907 28.24 temperature 10.0 270 > th dose independent rect. 1 20
910 28.24 precipitation 0.1 270 < th dose independent rect. 24 22
936 28.24 precipitation 0.1 270 < th dose dependent rect. 24 22
942 28.25 precipitation 0.1 270 < th dose independent rect. 5 22
953 28.25 precipitation 0.1 270 < th dose dependent rect. 5 22
975 28.27 wind 1.0 270 > th dose independent rect. 22 2
995 28.28 precipitation 0.1 270 < th dose independent rect. 1 20
999 28.28 temperature 10.0 270 > th dose dependent rect. 21 14