Os01g0358300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0358300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Tetratricopeptide-like helical domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.04 | 0.376 | 9.75 | -1.48 | 0.321 | -0.532 | 0.312 | -1.21 | -0.859 | 1.37 | 0.2358 | 4453 | -- | -- |
| 63.86 | 0.372 | 9.73 | -1.5 | 0.303 | -0.736 | 0.297 | -- | -0.879 | 1.09 | 0.3495 | 6650 | -- | -- |
| 64.42 | 0.374 | 9.75 | -1.5 | 0.323 | -0.528 | -- | -1.19 | -0.859 | 1.56 | 0.2372 | 4465 | -- | -- |
| 62.69 | 0.369 | 9.75 | -1.45 | 0.352 | -0.741 | -- | -- | -0.946 | 1.38 | 0.4182 | 19757 | -- | -- |
| 67.44 | 0.382 | 9.75 | -1.55 | -- | -0.494 | -- | -1.09 | -0.887 | -- | 0.1758 | 16924 | -- | -- |
| 76.54 | 0.41 | 9.71 | -1.7 | 0.312 | -- | 0.205 | -- | -0.794 | 1.4 | -- | -- | -- | -- |
| 76.7 | 0.41 | 9.71 | -1.71 | 0.313 | -- | -- | -- | -0.795 | 1.56 | -- | -- | -- | -- |
| 67.95 | 0.384 | 9.73 | -1.43 | -- | -0.761 | -- | -- | -0.898 | -- | 0.4276 | 20025 | -- | -- |
| 86.87 | 0.434 | 9.73 | -- | 0.269 | -1.1 | -- | -- | -0.87 | 1.28 | 1.047 | 47520 | -- | -- |
| 82.71 | 0.425 | 9.71 | -1.7 | -- | -- | -- | -- | -0.789 | -- | -- | -- | -- | -- |
| 153.63 | 0.58 | 9.67 | -- | 0.283 | -- | -- | -- | -0.605 | 1.36 | -- | -- | -- | -- |
| 91.34 | 0.445 | 9.72 | -- | -- | -1.11 | -- | -- | -0.866 | -- | 1.02 | 47520 | -- | -- |
| 158.57 | 0.588 | 9.66 | -- | -- | -- | -- | -- | -0.601 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.08 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 2 | 62.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 3 | 62.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 4 | 62.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 5 | 62.42 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 6 | 62.57 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 7 | 62.58 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 16 |
| 8 | 62.58 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 16 |
| 9 | 62.59 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 16 |
| 13 | 62.66 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 14 | 62.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 15 | 62.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 6 |
| 16 | 62.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 17 | 62.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 18 | 62.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 26 | 62.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 16 |
| 28 | 62.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 31 | 62.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 35 | 62.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 97 | 62.93 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 98 | 62.93 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 104 | 62.93 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 124 | 62.96 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 129 | 62.96 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 144 | 62.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 19 |
| 259 | 63.18 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 282 | 63.23 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 319 | 63.33 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 328 | 63.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 386 | 63.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 16 |
| 440 | 63.49 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 446 | 63.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 459 | 63.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 515 | 63.59 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 597 | 63.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 690 | 63.78 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 741 | 63.83 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 756 | 63.86 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 796 | 63.91 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 950 | 64.08 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |