Os01g0357200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sterol-binding domain containing protein.
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Os01g0357200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sterol-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.27 | 0.655 | 4.84 | 0.734 | 0.121 | -3.04 | 1.32 | 0.227 | -0.503 | 21.7 | 10.07 | 4428 | -- | -- |
| 194.32 | 0.649 | 4.85 | 0.688 | 0.122 | -3.04 | 1.32 | -- | -0.52 | 21.7 | 10.2 | 4426 | -- | -- |
| 199.94 | 0.659 | 4.84 | 0.74 | 0.271 | -3.1 | -- | 0.283 | -0.482 | 19.6 | 7.516 | 4973 | -- | -- |
| 200.02 | 0.659 | 4.85 | 0.678 | 0.263 | -3.11 | -- | -- | -0.497 | 19.5 | 9.044 | 4957 | -- | -- |
| 201.7 | 0.661 | 4.83 | 0.722 | -- | -3.05 | -- | 0.304 | -0.494 | -- | 2.026 | 4427 | -- | -- |
| 360.96 | 0.891 | 4.98 | -0.739 | 0.0933 | -- | 1.23 | -- | -1.12 | 21.4 | -- | -- | -- | -- |
| 364.77 | 0.894 | 4.98 | -0.776 | 0.202 | -- | -- | -- | -1.11 | 17.5 | -- | -- | -- | -- |
| 201.7 | 0.661 | 4.85 | 0.627 | -- | -3.03 | -- | -- | -0.522 | -- | -3.058 | 4427 | -- | -- |
| 208.45 | 0.672 | 4.88 | -- | 0.137 | -2.69 | -- | -- | -0.636 | 20.2 | 10.11 | 4337 | -- | -- |
| 366.89 | 0.895 | 4.98 | -0.783 | -- | -- | -- | -- | -1.12 | -- | -- | -- | -- | -- |
| 380.65 | 0.913 | 4.97 | -- | 0.215 | -- | -- | -- | -1.03 | 17.3 | -- | -- | -- | -- |
| 209.47 | 0.674 | 4.87 | -- | -- | -2.7 | -- | -- | -0.638 | -- | -6.105 | 4355 | -- | -- |
| 383.06 | 0.914 | 4.96 | -- | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 193.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 47 | 194.23 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 22 |
| 55 | 194.30 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 57 | 194.31 | temperature | 10 | 4320 | > th | dose dependent | sin | 4 | NA |
| 63 | 194.33 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 84 | 194.43 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 23 |
| 138 | 194.69 | temperature | 10 | 4320 | > th | dose dependent | rect. | 11 | 17 |
| 373 | 195.76 | temperature | 10 | 4320 | > th | dose dependent | sin | 18 | NA |
| 390 | 195.81 | temperature | 30 | 4320 | < th | dose dependent | rect. | 13 | 21 |
| 425 | 195.99 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 22 |
| 478 | 196.18 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 23 |
| 488 | 196.22 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |
| 502 | 196.25 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 11 |
| 510 | 196.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 526 | 196.31 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 558 | 196.40 | temperature | 30 | 4320 | < th | dose dependent | sin | 6 | NA |
| 587 | 196.50 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 607 | 196.55 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 15 |
| 729 | 196.88 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 735 | 196.90 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 815 | 197.14 | temperature | 30 | 4320 | < th | dose dependent | rect. | 12 | 16 |
| 849 | 197.24 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 959 | 197.57 | temperature | 30 | 4320 | < th | dose dependent | sin | 16 | NA |