Os01g0346600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0346600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.88 | 0.407 | 7.66 | -0.0101 | 0.733 | 0.305 | 0.374 | 3.84 | 0.303 | 7.94 | 28.7 | 4606 | -- | -- |
| 79.58 | 0.415 | 7.54 | 1.01 | 0.729 | 0.714 | 0.413 | -- | 0.534 | 7.99 | 27.99 | 4595 | -- | -- |
| 75.23 | 0.404 | 7.66 | -0.00321 | 0.736 | 0.297 | -- | 3.8 | 0.303 | 7.99 | 28.7 | 4700 | -- | -- |
| 79.85 | 0.416 | 7.54 | 1.01 | 0.729 | 0.73 | -- | -- | 0.538 | 8.24 | 28 | 4602 | -- | -- |
| 102.71 | 0.472 | 7.66 | 0.113 | -- | 0.471 | -- | 3.53 | 0.347 | -- | 28.4 | 4887 | -- | -- |
| 96.87 | 0.461 | 7.55 | 0.754 | 0.753 | -- | 0.366 | -- | 0.474 | 8.13 | -- | -- | -- | -- |
| 97.24 | 0.462 | 7.55 | 0.765 | 0.751 | -- | -- | -- | 0.474 | 8.26 | -- | -- | -- | -- |
| 106.14 | 0.48 | 7.57 | 1.02 | -- | 0.799 | -- | -- | 0.5 | -- | 28.8 | 4902 | -- | -- |
| 103.24 | 0.473 | 7.58 | -- | 0.723 | 0.523 | -- | -- | 0.368 | 8.03 | 29.4 | 3809 | -- | -- |
| 128.39 | 0.529 | 7.57 | 0.77 | -- | -- | -- | -- | 0.482 | -- | -- | -- | -- | -- |
| 112.67 | 0.497 | 7.57 | -- | 0.755 | -- | -- | -- | 0.389 | 8.19 | -- | -- | -- | -- |
| 131.21 | 0.534 | 7.59 | -- | -- | 0.552 | -- | -- | 0.441 | -- | 29.16 | 4861 | -- | -- |
| 144.05 | 0.56 | 7.59 | -- | -- | -- | -- | -- | 0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.43 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 16 | 73.58 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 18 | 73.60 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 33 | 73.62 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 41 | 73.64 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 120 | 74.36 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 124 | 74.40 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 146 | 74.51 | temperature | 30.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 150 | 74.53 | temperature | 30.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 241 | 74.79 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 246 | 74.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 263 | 74.84 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 265 | 74.84 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 273 | 74.88 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 290 | 74.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 292 | 74.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 294 | 74.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 8 |
| 442 | 75.16 | radiation | 10.0 | 720 | > th | dose independent | rect. | 16 | 19 |
| 468 | 75.22 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |
| 616 | 75.26 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 625 | 75.27 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 626 | 75.28 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 627 | 75.28 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 654 | 75.30 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 655 | 75.31 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 700 | 75.33 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 13 | 22 |
| 727 | 75.35 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 822 | 75.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 14 |
| 824 | 75.44 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 867 | 75.45 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 878 | 75.46 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 882 | 75.47 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 2 |
| 904 | 75.48 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 921 | 75.50 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |