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Os01g0343500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.3 (0.0301) R2 : 0.869
β1 : -2.11 (0.11) R2dD : 0.11 R2D : 0.0654
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.44 (0.068) R2dE : 0.739 R2E : 0.728
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.787 (0.0643) R2dN8 : 0.0578 R2N8 : 0.0249
σ : 0.563
deviance : 146.19
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 0.41
memory length : 147
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 22.3
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
143.59 0.563 8.28 -2.14 0.426 -3.46 0.0607 -0.184 -0.75 4.29 0.4875 133 22.8 --
143.61 0.558 8.29 -2.14 0.416 -3.45 0.133 -- -0.755 4.13 0.49 135 22.9 --
143.52 0.558 8.29 -2.13 0.403 -3.46 -- -0.185 -0.755 4.22 0.4819 135 22.8 --
143.65 0.558 8.29 -2.14 0.389 -3.48 -- -- -0.758 4.55 0.49 135 22.8 --
146.52 0.564 8.29 -2.1 -- -3.45 -- 0.0868 -0.764 -- 0.41 148 22.4 --
275.63 0.778 8.39 -2.16 3.33 -- 0.293 -- -0.873 23.3 -- -- -- --
275.99 0.778 8.39 -2.17 3.32 -- -- -- -0.874 23.3 -- -- -- --
146.19 0.563 8.3 -2.11 -- -3.44 -- -- -0.787 -- 0.41 147 22.3 --
264.22 0.757 8.3 -- 0.367 -3.53 -- -- -0.627 4.45 0.42 147 23 --
967.46 1.45 8.31 -2.09 -- -- -- -- -0.843 -- -- -- -- --
399.91 0.935 8.34 -- 3.3 -- -- -- -0.633 23.2 -- -- -- --
264.87 0.758 8.28 -- -- -3.41 -- -- -0.591 -- 0.1738 155 22.3 --
1082.22 1.54 8.26 -- -- -- -- -- -0.612 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 153.99 radiation 1.0 90 > th dose independent sin 4 NA
2 154.03 radiation 1.0 90 < th dose independent sin 4 NA
3 154.74 radiation 1.0 90 < th dose dependent sin 4 NA
6 156.64 temperature 20.0 10 > th dose independent rect. 6 7
17 161.79 temperature 30.0 270 < th dose independent rect. 5 5
18 161.93 temperature 15.0 270 > th dose independent rect. 5 18
20 162.13 radiation 1.0 270 < th dose dependent sin 9 NA
26 164.90 temperature 15.0 270 > th dose independent rect. 4 7
28 164.99 wind 9.0 30 < th dose independent rect. 13 17
29 165.13 radiation 40.0 30 < th dose independent rect. 12 18
31 165.23 wind 9.0 10 < th dose independent rect. 6 7
33 165.44 precipitation 0.1 10 < th dose independent rect. 6 7
34 165.44 precipitation 0.1 10 < th dose dependent rect. 6 7
35 165.48 temperature 30.0 270 < th dose independent rect. 4 7
37 165.63 temperature 10.0 10 > th dose independent rect. 6 7
39 165.63 atmosphere 995.0 10 > th dose independent rect. 6 7
40 165.63 atmosphere 1015.0 10 < th dose independent rect. 6 7
41 165.63 temperature 10.0 10 > th dose independent rect. 13 17
42 165.71 radiation 1.0 10 > th dose independent rect. 6 7
45 165.77 temperature 15.0 10 > th dose independent rect. 6 20
51 165.98 wind 9.0 30 < th dose dependent rect. 6 7
53 166.21 temperature 10.0 1440 > th dose independent rect. 7 7
56 166.21 atmosphere 995.0 1440 > th dose independent rect. 7 7
57 166.21 temperature 10.0 1440 > th dose independent rect. 14 17
62 166.45 radiation 1.0 90 > th dose independent rect. 18 19
63 166.57 wind 7.0 270 < th dose independent rect. 23 6
66 166.89 wind 7.0 10 < th dose independent rect. 2 4
69 167.01 radiation 1.0 270 < th dose dependent rect. 23 6
80 167.05 humidity 50.0 270 > th dose dependent rect. 5 5
86 167.21 temperature 10.0 270 > th dose independent rect. 23 6
87 167.21 temperature 30.0 270 < th dose independent rect. 23 6
88 167.21 humidity 50.0 270 > th dose independent rect. 23 6
91 167.21 atmosphere 995.0 270 > th dose independent rect. 23 6
92 167.21 radiation 20.0 270 < th dose independent rect. 23 6
96 167.26 radiation 40.0 270 < th dose dependent rect. 23 6
101 167.46 radiation 1.0 270 < th dose independent rect. 23 6
104 167.70 wind 5.0 270 < th dose independent rect. 1 2
106 167.76 temperature 10.0 10 > th dose independent rect. 2 4
108 167.76 temperature 30.0 10 < th dose independent rect. 2 4
109 167.76 humidity 50.0 10 > th dose independent rect. 2 4
112 167.76 atmosphere 995.0 10 > th dose independent rect. 2 4
113 167.76 atmosphere 1010.0 10 < th dose independent rect. 2 4
115 167.76 radiation 20.0 10 < th dose independent rect. 2 4
118 167.76 wind 9.0 270 < th dose independent rect. 10 19
120 167.78 precipitation 0.1 270 < th dose independent rect. 23 6
121 167.78 precipitation 0.1 270 < th dose dependent rect. 23 6
123 167.89 wind 9.0 270 < th dose independent rect. 11 17
124 168.00 precipitation 0.1 10 < th dose independent rect. 2 4
125 168.00 precipitation 0.1 10 < th dose dependent rect. 2 4
126 168.01 precipitation 0.1 270 < th dose independent rect. 5 18
127 168.01 precipitation 0.1 270 < th dose dependent rect. 5 18
129 168.31 precipitation 0.1 270 < th dose independent rect. 4 7
130 168.31 precipitation 0.1 270 < th dose dependent rect. 4 7
131 168.35 atmosphere 1015.0 270 < th dose independent rect. 23 6
133 168.45 precipitation 0.1 10 < th dose independent rect. 13 17
134 168.45 precipitation 0.1 10 < th dose dependent rect. 13 17
135 168.46 wind 7.0 270 < th dose independent rect. 5 5
141 168.59 temperature 10.0 270 > th dose independent rect. 1 2
143 168.59 temperature 30.0 270 < th dose independent rect. 1 2
144 168.59 humidity 50.0 270 > th dose independent rect. 1 2
147 168.59 atmosphere 995.0 270 > th dose independent rect. 1 2
148 168.59 atmosphere 1010.0 270 < th dose independent rect. 1 2
150 168.59 radiation 1.0 270 < th dose independent rect. 1 2
156 168.59 temperature 10.0 270 > th dose independent rect. 3 22
157 168.59 radiation 1.0 270 < th dose dependent rect. 1 2
162 168.65 radiation 40.0 10 < th dose dependent rect. 2 4
163 168.71 precipitation 0.1 270 < th dose independent rect. 1 2
164 168.71 precipitation 0.1 270 < th dose dependent rect. 1 2
167 168.83 precipitation 0.1 270 < th dose independent rect. 5 5
169 168.83 precipitation 0.1 270 < th dose dependent rect. 5 5
171 168.90 atmosphere 995.0 270 > th dose independent rect. 5 5
172 168.90 atmosphere 1015.0 270 < th dose independent rect. 5 5
174 168.90 atmosphere 995.0 270 > th dose independent rect. 4 7
175 168.90 atmosphere 1015.0 270 < th dose independent rect. 4 7
176 168.90 temperature 10.0 270 > th dose independent rect. 11 17
177 168.90 temperature 10.0 270 > th dose independent rect. 10 19
178 168.97 wind 9.0 270 < th dose independent rect. 4 7
180 168.98 humidity 50.0 270 > th dose independent rect. 5 5
181 169.00 precipitation 0.1 10 < th dose independent rect. 6 20
182 169.00 precipitation 0.1 10 < th dose dependent rect. 6 20
184 169.09 wind 9.0 10 < th dose independent rect. 6 20
187 169.25 humidity 50.0 270 > th dose independent rect. 4 7
205 169.46 wind 9.0 270 < th dose independent rect. 24 15
210 169.83 temperature 10.0 270 > th dose independent rect. 15 9
211 169.83 temperature 10.0 270 > th dose independent rect. 24 15
212 169.83 atmosphere 1015.0 270 < th dose independent rect. 24 15
215 170.01 radiation 40.0 270 < th dose independent rect. 15 9
221 170.28 wind 9.0 1440 < th dose independent rect. 3 4
222 170.28 temperature 10.0 1440 > th dose independent rect. 3 4
225 170.28 temperature 30.0 1440 < th dose independent rect. 3 4
229 170.28 humidity 50.0 1440 > th dose independent rect. 3 4
234 170.28 atmosphere 995.0 1440 > th dose independent rect. 3 4
235 170.28 radiation 40.0 1440 < th dose independent rect. 3 4
239 170.28 temperature 10.0 1440 > th dose independent rect. 7 20
257 170.35 atmosphere 995.0 270 > th dose independent rect. 24 15
259 170.44 radiation 1.0 270 < th dose dependent rect. 23 15
265 170.58 wind 9.0 270 < th dose independent rect. 5 18
303 171.51 temperature 15.0 270 > th dose independent rect. 4 20
323 171.74 humidity 50.0 30 > th dose independent rect. 6 7
324 171.76 radiation 1.0 90 < th dose independent rect. 1 16
329 171.87 wind 9.0 270 < th dose dependent rect. 1 2
330 171.93 wind 9.0 10 < th dose dependent rect. 2 4
332 172.04 atmosphere 995.0 10 > th dose independent rect. 13 17
338 172.19 wind 1.0 270 > th dose independent rect. 1 2
343 172.22 wind 9.0 90 < th dose dependent rect. 1 5
347 172.47 precipitation 0.1 270 < th dose independent rect. 24 15
348 172.47 precipitation 0.1 270 < th dose dependent rect. 24 15
351 172.54 wind 9.0 270 < th dose independent rect. 15 9
354 172.71 wind 1.0 10 > th dose independent rect. 6 7
355 172.80 atmosphere 995.0 10 > th dose independent rect. 6 20
356 172.84 radiation 1.0 90 < th dose independent rect. 1 6
357 172.85 radiation 1.0 270 < th dose independent sin 9 NA
358 172.90 wind 9.0 270 < th dose dependent rect. 5 5
359 172.95 radiation 40.0 270 < th dose independent rect. 5 5
364 173.12 humidity 50.0 270 > th dose dependent rect. 6 3
369 173.24 radiation 1.0 270 > th dose independent sin 9 NA
370 173.24 precipitation 0.1 270 < th dose independent rect. 10 19
371 173.24 precipitation 0.1 270 < th dose dependent rect. 10 19
389 173.52 precipitation 0.1 270 < th dose independent rect. 11 17
390 173.52 precipitation 0.1 270 < th dose dependent rect. 11 17
392 173.53 precipitation 0.1 270 < th dose independent rect. 3 22
393 173.53 precipitation 0.1 270 < th dose dependent rect. 3 22
394 173.59 atmosphere 1015.0 10 < th dose independent rect. 13 17
396 173.62 precipitation 0.1 270 < th dose independent rect. 15 9
397 173.62 precipitation 0.1 270 < th dose dependent rect. 15 9
409 173.92 wind 9.0 270 < th dose dependent rect. 23 6
414 173.99 radiation 1.0 90 < th dose independent rect. 1 10
420 174.11 humidity 50.0 10 > th dose dependent rect. 2 4
423 174.17 humidity 50.0 10 > th dose independent rect. 13 17
429 174.33 radiation 1.0 90 > th dose independent rect. 6 5
439 174.57 wind 9.0 270 < th dose independent rect. 3 22
450 174.66 atmosphere 995.0 10 > th dose dependent rect. 2 4
471 175.19 wind 9.0 10 < th dose dependent rect. 24 6
473 175.24 radiation 1.0 90 < th dose dependent rect. 2 15
530 176.08 humidity 50.0 270 > th dose dependent rect. 1 2
603 176.21 wind 1.0 270 > th dose independent rect. 23 6
656 176.44 wind 1.0 270 > th dose independent rect. 15 9
664 176.58 radiation 1.0 90 < th dose dependent rect. 2 13
673 176.69 humidity 90.0 10 < th dose independent rect. 6 7
732 177.05 temperature 30.0 10 < th dose dependent rect. 2 4
749 177.28 wind 1.0 270 > th dose independent rect. 24 4
753 177.33 precipitation 0.1 270 < th dose independent rect. 4 20
754 177.33 precipitation 0.1 270 < th dose dependent rect. 4 20
764 177.46 radiation 1.0 90 < th dose dependent rect. 2 9
858 178.17 atmosphere 1015.0 270 < th dose independent rect. 5 18
965 178.92 temperature 10.0 10 > th dose dependent rect. 2 4
967 178.93 radiation 40.0 270 < th dose dependent rect. 6 3
972 179.00 temperature 30.0 270 < th dose dependent rect. 1 2
982 179.28 radiation 1.0 270 < th dose independent rect. 23 15
984 179.28 wind 9.0 270 < th dose independent rect. 4 20