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Os01g0338200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mov34/MPN/PAD-1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.012) R2 : 0.00785
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.048 (0.0253) R2dN8 : 0.0101 R2N8 : 0.00785
σ : 0.226
deviance : 23.42
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.88 0.175 11.8 0.147 0.058 0.622 0.458 -0.0302 0.165 23 29.9 78 -- --
13.88 0.173 11.8 0.142 0.057 0.622 0.452 -- 0.164 23 29.8 77 -- --
14.64 0.178 11.8 0.0961 0.0366 0.655 -- 0.276 0.157 22.7 29.83 71 -- --
14.73 0.179 11.8 0.135 0.0628 0.612 -- -- 0.162 0.442 29.8 78 -- --
14.74 0.179 11.8 0.0817 -- 0.663 -- 0.313 0.159 -- 29.7 67 -- --
18.93 0.204 11.8 -0.0153 0.247 -- 0.444 -- 0.0428 1.83 -- -- -- --
19.65 0.208 11.8 -0.0296 0.252 -- -- -- 0.0398 2.27 -- -- -- --
14.86 0.18 11.8 0.132 -- 0.659 -- -- 0.169 -- 29.89 58 -- --
15.06 0.181 11.8 -- 0.0793 0.563 -- -- 0.136 1.11 29.8 78 -- --
23.41 0.226 11.8 -0.0191 -- -- -- -- 0.0459 -- -- -- -- --
19.67 0.207 11.8 -- 0.251 -- -- -- 0.0431 2.27 -- -- -- --
15.29 0.182 11.8 -- -- 0.621 -- -- 0.148 -- 29.94 53 -- --
23.42 0.226 11.8 -- -- -- -- -- 0.048 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.83 temperature 10 270 > th dose dependent rect. 6 21
2 13.01 temperature 10 270 > th dose dependent rect. 8 17
11 13.23 temperature 30 90 < th dose dependent rect. 1 22
20 13.33 temperature 20 10 > th dose dependent rect. 9 20
22 13.39 temperature 30 90 < th dose dependent rect. 11 22
24 13.41 temperature 15 30 > th dose dependent rect. 6 23
26 13.43 temperature 30 10 < th dose dependent rect. 1 23
33 13.47 temperature 30 90 < th dose dependent rect. 23 23
45 13.51 temperature 15 90 > th dose dependent rect. 8 23
52 13.54 temperature 30 90 < th dose dependent rect. 13 22
53 13.54 temperature 20 10 > th dose dependent rect. 8 23
55 13.55 temperature 30 90 < th dose dependent rect. 3 20
71 13.62 temperature 30 90 < th dose dependent rect. 15 18
86 13.69 temperature 10 270 > th dose dependent rect. 16 23
94 13.72 temperature 30 30 < th dose dependent rect. 3 23
102 13.75 temperature 30 10 < th dose dependent rect. 14 22
120 13.83 temperature 30 90 < th dose dependent rect. 3 18
133 13.87 temperature 25 270 < th dose independent rect. 23 22
145 13.90 temperature 30 90 < th dose dependent no NA NA
161 13.92 temperature 30 10 < th dose dependent rect. 11 23
190 13.99 temperature 20 10 > th dose dependent rect. 17 23
196 14.02 temperature 25 270 < th dose independent rect. 1 20
223 14.06 temperature 30 30 < th dose dependent rect. 21 23
224 14.07 temperature 10 10 > th dose dependent no NA NA
246 14.10 temperature 30 10 < th dose dependent rect. 5 15
259 14.11 temperature 30 30 < th dose dependent rect. 19 23
276 14.15 temperature 25 270 < th dose independent rect. 11 22
307 14.18 temperature 30 10 < th dose dependent rect. 12 21
322 14.22 temperature 25 270 > th dose independent rect. 16 22
336 14.23 temperature 30 30 < th dose dependent rect. 17 23
355 14.26 temperature 20 10 > th dose dependent rect. 23 23
419 14.36 temperature 30 10 < th dose dependent rect. 3 19
488 14.47 temperature 15 270 > th dose dependent rect. 21 15
500 14.48 temperature 20 10 > th dose dependent rect. 4 23
501 14.48 temperature 20 90 > th dose dependent rect. 20 23
502 14.48 temperature 30 30 < th dose dependent rect. 7 23
530 14.52 temperature 25 270 > th dose independent rect. 4 22
551 14.54 temperature 20 10 > th dose dependent rect. 2 23
553 14.55 radiation 1 1440 < th dose dependent rect. 8 11
574 14.57 radiation 1 1440 < th dose independent rect. 8 13
587 14.58 temperature 25 270 < th dose independent no NA NA
588 14.58 radiation 1 1440 < th dose independent rect. 8 11
606 14.59 radiation 1 1440 < th dose independent rect. 15 4
618 14.59 radiation 1 1440 < th dose dependent sin 17 NA
619 14.59 radiation 1 1440 < th dose dependent rect. 15 4
653 14.61 radiation 1 1440 < th dose independent sin 17 NA
661 14.61 radiation 1 1440 > th dose independent rect. 8 11
704 14.62 radiation 1 720 < th dose dependent sin 23 NA
722 14.63 temperature 25 270 > th dose independent no NA NA
723 14.63 radiation 1 1440 > th dose independent sin 17 NA
750 14.64 radiation 1 1440 > th dose independent rect. 15 4
779 14.64 temperature 25 270 > th dose independent rect. 19 23
821 14.66 radiation 1 720 < th dose independent sin 23 NA
849 14.67 temperature 25 270 > th dose independent rect. 8 23
883 14.68 radiation 40 4320 < th dose dependent rect. 21 8