Os01g0331100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lipase homolog (Fragment).
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Os01g0331100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lipase homolog (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.48 | 0.712 | 7.21 | 2.52 | 0.952 | 1.72 | -0.678 | 6.57 | -0.501 | 6.69 | 16.97 | 3283 | -- | -- |
| 243.91 | 0.727 | 7.42 | 1.6 | 1.21 | 1.38 | -0.758 | -- | -0.978 | 6.36 | 31.97 | 20878 | -- | -- |
| 230.59 | 0.707 | 7.21 | 2.51 | 0.962 | 1.73 | -- | 6.63 | -0.501 | 6.73 | 17 | 3307 | -- | -- |
| 213.47 | 0.68 | 7.56 | 0.494 | 0.911 | 2.11 | -- | -- | -1.42 | 6.78 | 31.57 | 21374 | -- | -- |
| 273.09 | 0.77 | 7.23 | 2.57 | -- | 1.54 | -- | 6.11 | -0.468 | -- | 17.78 | 2929 | -- | -- |
| 332.25 | 0.855 | 7.37 | 1.56 | 0.947 | -- | -0.784 | -- | -0.601 | 6.35 | -- | -- | -- | -- |
| 333.76 | 0.856 | 7.37 | 1.55 | 0.943 | -- | -- | -- | -0.598 | 6.4 | -- | -- | -- | -- |
| 255.25 | 0.744 | 7.59 | 0.65 | -- | 2.23 | -- | -- | -1.47 | -- | 32.17 | 20042 | -- | -- |
| 204.21 | 0.666 | 7.58 | -- | 0.935 | 2.1 | -- | -- | -1.52 | 6.65 | 29.48 | 36395 | -- | -- |
| 379.99 | 0.911 | 7.39 | 1.58 | -- | -- | -- | -- | -0.578 | -- | -- | -- | -- | -- |
| 397.14 | 0.932 | 7.41 | -- | 0.964 | -- | -- | -- | -0.771 | 6.31 | -- | -- | -- | -- |
| 249.21 | 0.735 | 7.6 | -- | -- | 2.09 | -- | -- | -1.52 | -- | 29.19 | 37378 | -- | -- |
| 445.44 | 0.985 | 7.43 | -- | -- | -- | -- | -- | -0.753 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 201.38 | temperature | 25 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 2 | 201.46 | temperature | 25 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 4 | 201.55 | temperature | 25 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 18 | 202.71 | temperature | 30 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 32 | 203.34 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 43 | 203.78 | temperature | 30 | 43200 | > th | dose dependent | rect. | 18 | 21 |
| 47 | 203.82 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 76 | 203.87 | temperature | 30 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 91 | 204.04 | temperature | 30 | 43200 | > th | dose dependent | sin | 4 | NA |
| 120 | 204.16 | temperature | 30 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 127 | 204.27 | temperature | 30 | 43200 | > th | dose dependent | no | NA | NA |
| 129 | 204.27 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 11 |
| 272 | 204.36 | temperature | 30 | 43200 | > th | dose dependent | rect. | 12 | 7 |
| 323 | 204.45 | temperature | 30 | 43200 | > th | dose independent | rect. | 15 | 20 |
| 327 | 204.46 | temperature | 30 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 331 | 204.48 | temperature | 30 | 43200 | < th | dose independent | sin | 11 | NA |
| 356 | 204.59 | temperature | 30 | 43200 | > th | dose independent | sin | 11 | NA |
| 382 | 204.93 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 428 | 205.20 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 432 | 205.21 | temperature | 30 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 449 | 205.32 | temperature | 25 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 468 | 205.57 | temperature | 30 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 549 | 205.99 | temperature | 25 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 552 | 206.00 | temperature | 30 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 569 | 206.09 | temperature | 25 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 712 | 206.92 | temperature | 25 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 719 | 206.98 | temperature | 30 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 726 | 206.99 | temperature | 30 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 740 | 207.01 | temperature | 25 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 762 | 207.08 | temperature | 30 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 763 | 207.09 | temperature | 30 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 768 | 207.10 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 770 | 207.10 | temperature | 30 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 774 | 207.11 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 807 | 207.12 | temperature | 30 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 814 | 207.16 | temperature | 30 | 43200 | > th | dose independent | no | NA | NA |
| 816 | 207.16 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 917 | 207.22 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 936 | 207.26 | temperature | 30 | 43200 | < th | dose independent | no | NA | NA |
| 938 | 207.26 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 939 | 207.26 | temperature | 30 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 946 | 207.26 | temperature | 30 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 950 | 207.26 | temperature | 30 | 43200 | < th | dose independent | rect. | 1 | 18 |
| 964 | 207.26 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 20 |
| 990 | 207.27 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 11 |