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Os01g0328600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0157) R2 : 0.869
β1 : -1.27 (0.0573) R2dD : 0.146 R2D : 0.106
β2 : 2.02 (0.0404) R2dC : 0.725 R2C : 0.695
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.416 (0.0334) R2dN8 : 0.0598 R2N8 : 0.00379
σ : 0.294
deviance : 39.47
__
_____
C
peak time of C : 7.26
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.43 0.272 10.6 -0.679 2.02 -0.129 0.25 4.08 -0.351 7.36 30.06 1189 -- --
34.22 0.272 10.7 -1.36 2.03 0.351 0.268 -- -0.357 7.33 32.5 2492 -- --
33.6 0.27 10.6 -0.676 2.02 -0.128 -- 4.06 -0.352 7.36 30.1 1193 -- --
34.4 0.273 10.7 -1.35 2.03 0.351 -- -- -0.356 7.34 32.54 2495 -- --
247.53 0.733 10.6 -0.289 -- -0.309 -- 5.73 -0.283 -- 29.88 1393 -- --
39.28 0.294 10.7 -1.27 2.02 -- 0.261 -- -0.416 7.26 -- -- -- --
39.47 0.294 10.7 -1.27 2.02 -- -- -- -0.416 7.26 -- -- -- --
245.39 0.73 10.7 -1.54 -- 0.449 -- -- -0.451 -- 33.5 7095 -- --
80.91 0.419 10.7 -- 2 0.136 -- -- -0.226 7.33 33.3 5455 -- --
256.66 0.749 10.8 -1.23 -- -- -- -- -0.382 -- -- -- -- --
81.79 0.423 10.7 -- 2.01 -- -- -- -0.275 7.3 -- -- -- --
271.25 0.767 10.8 -- -- -0.616 -- -- -0.381 -- 35.45 47520 -- --
296.67 0.804 10.7 -- -- -- -- -- -0.245 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.21 wind 5.0 270 < th dose independent rect. 3 2
2 31.46 precipitation 0.1 270 < th dose independent rect. 3 2
3 31.46 precipitation 0.1 270 < th dose dependent rect. 3 2
5 31.59 wind 9.0 270 < th dose dependent rect. 3 2
6 31.67 wind 5.0 90 < th dose independent rect. 3 5
9 31.70 temperature 20.0 270 > th dose independent rect. 21 4
10 31.75 humidity 50.0 90 > th dose dependent rect. 8 19
12 31.77 temperature 10.0 270 > th dose independent rect. 3 2
14 31.77 temperature 30.0 270 < th dose independent rect. 3 2
15 31.77 humidity 50.0 270 > th dose independent rect. 3 2
18 31.77 atmosphere 995.0 270 > th dose independent rect. 3 2
19 31.77 atmosphere 1010.0 270 < th dose independent rect. 3 2
21 31.77 radiation 20.0 270 < th dose independent rect. 3 2
24 31.77 temperature 10.0 270 > th dose independent rect. 5 22
25 31.77 radiation 30.0 270 < th dose dependent rect. 3 2
28 31.79 radiation 1.0 270 < th dose independent rect. 3 2
30 31.79 radiation 1.0 270 < th dose dependent rect. 3 2
32 31.82 wind 9.0 270 < th dose independent rect. 5 22
33 31.83 wind 7.0 90 < th dose dependent rect. 3 5
36 31.87 temperature 30.0 90 < th dose independent rect. 8 19
41 31.99 atmosphere 995.0 270 > th dose independent rect. 5 22
42 32.01 precipitation 0.1 90 < th dose independent rect. 3 5
43 32.01 atmosphere 995.0 90 > th dose independent rect. 8 19
44 32.01 precipitation 0.1 90 < th dose dependent rect. 3 5
53 32.12 atmosphere 1015.0 90 < th dose independent rect. 8 19
59 32.17 temperature 20.0 270 > th dose independent rect. 22 2
61 32.18 temperature 30.0 10 < th dose independent rect. 8 20
65 32.20 atmosphere 995.0 270 > th dose independent rect. 6 20
68 32.21 wind 9.0 90 < th dose independent rect. 8 19
71 32.22 temperature 10.0 90 > th dose independent rect. 3 5
73 32.22 temperature 30.0 90 < th dose independent rect. 3 5
74 32.22 humidity 50.0 90 > th dose independent rect. 3 5
76 32.22 atmosphere 995.0 90 > th dose independent rect. 3 5
77 32.22 atmosphere 1015.0 90 < th dose independent rect. 3 5
78 32.22 radiation 40.0 90 < th dose independent rect. 3 5
79 32.22 temperature 10.0 90 > th dose independent rect. 8 19
82 32.22 humidity 50.0 270 > th dose dependent rect. 6 20
85 32.24 temperature 20.0 10 > th dose independent rect. 23 5
93 32.29 humidity 50.0 270 > th dose dependent rect. 3 2
97 32.34 wind 9.0 270 < th dose independent rect. 6 20
114 32.37 temperature 10.0 270 > th dose independent rect. 6 20
119 32.38 precipitation 0.1 270 < th dose independent rect. 5 22
120 32.38 temperature 10.0 270 > th dose dependent rect. 3 2
123 32.38 precipitation 0.1 270 < th dose dependent rect. 5 22
131 32.41 radiation 40.0 90 < th dose dependent rect. 3 5
153 32.46 humidity 50.0 90 > th dose independent rect. 8 19
158 32.47 precipitation 0.1 10 < th dose independent rect. 3 5
159 32.47 atmosphere 1015.0 270 < th dose dependent rect. 3 2
161 32.47 precipitation 0.1 10 < th dose dependent rect. 3 5
164 32.48 humidity 50.0 90 > th dose dependent rect. 15 12
168 32.50 wind 1.0 270 > th dose independent rect. 3 1
177 32.53 atmosphere 995.0 10 > th dose independent rect. 8 20
205 32.58 temperature 10.0 270 > th dose dependent rect. 20 5
239 32.64 precipitation 0.1 270 < th dose independent rect. 6 20
240 32.64 temperature 10.0 270 > th dose dependent rect. 23 1
241 32.64 precipitation 0.1 270 < th dose dependent rect. 6 20
252 32.67 precipitation 0.1 90 < th dose independent rect. 8 19
255 32.67 precipitation 0.1 90 < th dose dependent rect. 8 19
262 32.70 precipitation 0.1 270 < th dose independent rect. 11 10
267 32.70 precipitation 0.1 270 < th dose dependent rect. 11 10
274 32.73 precipitation 0.1 10 < th dose independent rect. 8 19
277 32.73 precipitation 0.1 10 < th dose dependent rect. 8 19
283 32.75 temperature 10.0 270 > th dose dependent rect. 19 7
304 32.78 humidity 50.0 270 > th dose independent rect. 21 14
311 32.79 temperature 10.0 10 > th dose independent rect. 4 4
313 32.79 temperature 30.0 10 < th dose independent rect. 4 4
314 32.79 humidity 50.0 10 > th dose independent rect. 4 4
316 32.79 atmosphere 995.0 10 > th dose independent rect. 4 4
317 32.79 atmosphere 1015.0 10 < th dose independent rect. 4 4
318 32.79 temperature 10.0 10 > th dose independent rect. 8 20
323 32.80 temperature 10.0 270 > th dose independent rect. 11 10
324 32.80 temperature 10.0 270 > th dose independent rect. 21 14
325 32.80 atmosphere 995.0 270 > th dose independent rect. 21 14
338 32.82 temperature 20.0 270 > th dose independent rect. 6 19
340 32.82 temperature 10.0 270 > th dose dependent rect. 2 4
354 32.83 humidity 50.0 90 > th dose dependent rect. 3 5
357 32.84 wind 9.0 270 < th dose independent rect. 21 14
363 32.85 radiation 40.0 10 < th dose independent rect. 4 4
364 32.85 wind 1.0 270 > th dose independent rect. 11 10
376 32.86 atmosphere 1000.0 270 > th dose independent rect. 21 4
387 32.88 humidity 60.0 90 > th dose dependent rect. 21 6
394 32.89 temperature 10.0 10 > th dose dependent rect. 23 5
430 32.93 atmosphere 1015.0 270 < th dose independent rect. 21 14
431 32.93 precipitation 0.1 270 < th dose independent rect. 2 17
435 32.93 precipitation 0.1 270 < th dose dependent rect. 2 17
437 32.94 atmosphere 1000.0 90 > th dose independent rect. 21 6
440 32.94 atmosphere 1015.0 90 < th dose dependent rect. 3 4
469 32.96 temperature 10.0 10 > th dose dependent rect. 12 11
470 32.97 humidity 80.0 270 > th dose independent rect. 23 1
475 32.98 atmosphere 1015.0 270 < th dose independent rect. 20 5
478 32.98 humidity 50.0 270 > th dose independent rect. 5 22
485 32.99 radiation 1.0 270 < th dose independent rect. 7 19
486 32.99 humidity 50.0 270 > th dose dependent rect. 21 4
491 33.00 atmosphere 1000.0 270 > th dose independent rect. 19 7
497 33.01 precipitation 0.1 270 < th dose independent rect. 1 20
505 33.01 precipitation 0.1 270 < th dose dependent rect. 1 20
530 33.06 atmosphere 1015.0 270 < th dose independent rect. 19 7
571 33.10 atmosphere 995.0 270 > th dose independent rect. 6 10
576 33.10 temperature 10.0 10 > th dose dependent rect. 4 4
581 33.10 humidity 50.0 270 > th dose dependent rect. 19 7
586 33.11 humidity 80.0 270 > th dose independent rect. 21 4
587 33.11 temperature 30.0 270 < th dose dependent rect. 3 2
591 33.11 radiation 1.0 270 < th dose dependent rect. 7 19
597 33.12 radiation 1.0 270 < th dose dependent rect. 5 21
598 33.13 atmosphere 1000.0 270 > th dose independent rect. 23 1
603 33.13 temperature 30.0 270 < th dose independent rect. 21 14
613 33.15 atmosphere 1015.0 270 < th dose independent rect. 23 1
616 33.15 precipitation 0.1 270 < th dose independent rect. 21 14
618 33.15 precipitation 0.1 270 < th dose dependent rect. 21 14
624 33.16 wind 9.0 270 < th dose independent rect. 11 10
634 33.17 humidity 80.0 90 > th dose independent rect. 21 6
641 33.18 radiation 1.0 270 < th dose independent rect. 12 14
647 33.19 wind 1.0 270 > th dose independent rect. 1 5
648 33.19 wind 9.0 1440 < th dose independent rect. 4 5
649 33.19 temperature 10.0 1440 > th dose independent rect. 4 5
652 33.19 humidity 50.0 1440 > th dose independent rect. 4 5
655 33.19 atmosphere 995.0 1440 > th dose independent rect. 4 5
657 33.19 atmosphere 1015.0 1440 < th dose independent rect. 4 5
658 33.19 precipitation 0.1 270 < th dose independent rect. 16 14
660 33.19 temperature 10.0 1440 > th dose independent rect. 9 19
665 33.19 atmosphere 995.0 270 > th dose dependent rect. 3 2
667 33.19 precipitation 0.1 270 < th dose dependent rect. 16 14
672 33.21 precipitation 0.1 270 < th dose independent rect. 24 23
676 33.21 precipitation 0.1 270 < th dose dependent rect. 24 23
678 33.22 temperature 30.0 90 < th dose independent rect. 15 12
705 33.26 radiation 1.0 90 < th dose dependent rect. 13 14
726 33.29 humidity 60.0 270 > th dose dependent rect. 23 1
734 33.30 precipitation 0.1 270 < th dose independent rect. 19 7
741 33.30 precipitation 0.1 270 < th dose dependent rect. 19 7
745 33.31 temperature 15.0 270 > th dose independent rect. 2 17
751 33.31 temperature 10.0 270 > th dose dependent rect. 11 9
752 33.31 temperature 10.0 30 > th dose dependent rect. 4 19
755 33.32 temperature 10.0 270 > th dose independent rect. 19 7
756 33.32 temperature 30.0 270 < th dose independent rect. 19 7
757 33.32 humidity 50.0 270 > th dose independent rect. 19 7
760 33.32 radiation 1.0 270 < th dose independent rect. 19 7
765 33.32 radiation 1.0 270 < th dose independent rect. 17 9
769 33.32 atmosphere 1015.0 270 < th dose independent rect. 2 17
773 33.32 radiation 1.0 270 < th dose dependent rect. 19 7
782 33.33 wind 9.0 270 < th dose independent rect. 19 7
795 33.34 precipitation 0.1 270 < th dose independent rect. 21 4
798 33.34 radiation 1.0 30 > th dose independent rect. 17 15
803 33.34 precipitation 0.1 270 < th dose dependent rect. 21 4
804 33.34 wind 9.0 270 < th dose dependent rect. 19 6
836 33.37 wind 9.0 270 < th dose independent rect. 21 4
837 33.37 temperature 10.0 270 > th dose independent rect. 21 4
838 33.37 temperature 30.0 270 < th dose independent rect. 21 4
839 33.37 humidity 50.0 270 > th dose independent rect. 21 4
843 33.37 radiation 1.0 270 < th dose independent rect. 21 4
851 33.37 precipitation 0.1 90 < th dose independent rect. 21 6
857 33.37 temperature 10.0 270 > th dose independent rect. 1 20
861 33.37 radiation 1.0 270 < th dose dependent rect. 21 4
866 33.37 precipitation 0.1 90 < th dose dependent rect. 21 6
886 33.39 atmosphere 995.0 90 > th dose dependent rect. 3 5
890 33.40 radiation 1.0 30 < th dose independent sin 12 NA
904 33.41 temperature 10.0 90 > th dose independent rect. 21 6
905 33.41 temperature 30.0 90 < th dose independent rect. 21 6
906 33.41 humidity 50.0 90 > th dose independent rect. 21 6
911 33.41 radiation 1.0 90 < th dose independent rect. 21 6
931 33.41 radiation 1.0 90 < th dose dependent rect. 21 6
941 33.42 wind 9.0 90 < th dose independent rect. 21 6
943 33.42 wind 9.0 270 < th dose independent rect. 2 17
947 33.43 atmosphere 1015.0 270 < th dose independent rect. 11 10
951 33.43 radiation 1.0 30 < th dose dependent sin 12 NA
974 33.44 atmosphere 1015.0 270 < th dose independent rect. 1 19