Os01g0303300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
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Os01g0303300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 392.88 | 0.931 | 4.83 | 0.832 | 2.53 | 2.56 | 2.63 | -2.36 | -0.839 | 16.3 | 19.95 | 1483 | 2.87 | -- |
| 409.84 | 0.943 | 4.9 | 0.399 | 2.51 | 2.87 | 2.05 | -- | -0.874 | 16.2 | 19.93 | 1501 | 2.45 | -- |
| 409.1 | 0.942 | 4.83 | 0.79 | 2.6 | 2.68 | -- | -2.27 | -0.824 | 16.3 | 20.2 | 1536 | 1.99 | -- |
| 422.01 | 0.957 | 4.92 | 0.217 | 2.6 | 2.75 | -- | -- | -1.01 | 16.3 | 20.3 | 1505 | 1.65 | -- |
| 752.63 | 1.28 | 4.76 | 1.15 | -- | 3.12 | -- | -2.55 | -0.727 | -- | 20.04 | 2548 | 0.898 | -- |
| 653.35 | 1.2 | 5.09 | -1.04 | 2.63 | -- | 2.13 | -- | -1.74 | 16.2 | -- | -- | -- | -- |
| 666 | 1.21 | 5.08 | -1.02 | 2.64 | -- | -- | -- | -1.72 | 16.3 | -- | -- | -- | -- |
| 748.76 | 1.27 | 4.92 | 0.163 | -- | 3.25 | -- | -- | -1.04 | -- | 20.3 | 1250 | 1.32 | -- |
| 420.52 | 0.955 | 4.91 | -- | 2.58 | 2.85 | -- | -- | -0.994 | 16.4 | 20.39 | 1475 | 0.186 | -- |
| 1042.26 | 1.51 | 5.06 | -1.12 | -- | -- | -- | -- | -1.79 | -- | -- | -- | -- | -- |
| 693.28 | 1.23 | 5.05 | -- | 2.66 | -- | -- | -- | -1.61 | 16.3 | -- | -- | -- | -- |
| 743.32 | 1.27 | 4.86 | -- | -- | 3.43 | -- | -- | -0.972 | -- | 20.33 | 1230 | 0.143 | -- |
| 1075.5 | 1.53 | 5.04 | -- | -- | -- | -- | -- | -1.67 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 386.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 3 | 388.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 46 | 393.87 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 50 | 394.25 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 66 | 395.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 83 | 396.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 90 | 397.18 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 106 | 398.13 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 110 | 398.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 6 |
| 158 | 401.38 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 248 | 407.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 265 | 408.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 274 | 408.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 281 | 409.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 394 | 417.49 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 543 | 427.52 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 552 | 427.94 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 556 | 428.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 560 | 428.58 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 562 | 428.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 586 | 429.89 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 4 |
| 650 | 431.51 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 683 | 432.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 690 | 432.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 693 | 432.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 715 | 433.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 743 | 434.01 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |