Os01g0295900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M22, glycoprotease domain containing protein.
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Os01g0295900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M22, glycoprotease domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.86 | 0.635 | 5.48 | -0.324 | 0.499 | -0.686 | -1.29 | -0.801 | -0.744 | 19 | 21.4 | 901 | -- | -- |
| 184.1 | 0.632 | 5.45 | -0.146 | 0.496 | -0.604 | -1.51 | -- | -0.688 | 19.1 | 21.89 | 900 | -- | -- |
| 186.87 | 0.637 | 5.49 | -0.346 | 0.518 | -0.69 | -- | -0.994 | -0.747 | 18.9 | 21.4 | 888 | -- | -- |
| 190.1 | 0.642 | 5.46 | -0.122 | 0.491 | -0.6 | -- | -- | -0.704 | 18.9 | 21.74 | 899 | -- | -- |
| 199.35 | 0.658 | 5.48 | -0.277 | -- | -0.76 | -- | -0.95 | -0.76 | -- | 21.1 | 1247 | -- | -- |
| 198.08 | 0.66 | 5.49 | -0.361 | 0.441 | -- | -1.52 | -- | -0.874 | 18.7 | -- | -- | -- | -- |
| 203.71 | 0.668 | 5.5 | -0.335 | 0.443 | -- | -- | -- | -0.877 | 18.1 | -- | -- | -- | -- |
| 200.44 | 0.659 | 5.44 | -0.124 | -- | -0.6 | -- | -- | -0.681 | -- | 22.18 | 1220 | -- | -- |
| 190.34 | 0.643 | 5.45 | -- | 0.499 | -0.636 | -- | -- | -0.674 | 18.9 | 21.77 | 899 | -- | -- |
| 213.89 | 0.683 | 5.49 | -0.347 | -- | -- | -- | -- | -0.887 | -- | -- | -- | -- | -- |
| 206.67 | 0.672 | 5.49 | -- | 0.448 | -- | -- | -- | -0.84 | 18.1 | -- | -- | -- | -- |
| 200.87 | 0.66 | 5.44 | -- | -- | -0.622 | -- | -- | -0.671 | -- | 22.1 | 1220 | -- | -- |
| 217.07 | 0.688 | 5.48 | -- | -- | -- | -- | -- | -0.849 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 174.96 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 2 | 175.56 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 3 | 175.56 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 25 | 177.38 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 29 | 177.56 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 36 | 177.87 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 53 | 178.45 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 118 | 180.04 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 122 | 180.18 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 125 | 180.31 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 147 | 180.56 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 157 | 180.66 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 18 |
| 158 | 180.75 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 160 | 180.78 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 173 | 180.95 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 280 | 181.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 286 | 181.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 294 | 181.68 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 300 | 181.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 302 | 181.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 329 | 181.96 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 359 | 182.16 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 368 | 182.23 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 373 | 182.27 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 399 | 182.39 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 413 | 182.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 415 | 182.49 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 447 | 182.65 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 474 | 182.78 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 478 | 182.80 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 504 | 182.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 521 | 182.97 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 529 | 182.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 536 | 183.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 541 | 183.04 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 589 | 183.27 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 595 | 183.27 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 606 | 183.31 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 613 | 183.32 | wind | 9.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 650 | 183.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 653 | 183.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 669 | 183.45 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 670 | 183.46 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 674 | 183.48 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 17 |
| 715 | 183.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 742 | 183.62 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 752 | 183.65 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 755 | 183.65 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 7 |
| 759 | 183.66 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 781 | 183.69 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 801 | 183.71 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 808 | 183.72 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 823 | 183.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 825 | 183.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 860 | 183.76 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 1 | NA |
| 865 | 183.77 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 879 | 183.77 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 896 | 183.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 897 | 183.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 898 | 183.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 899 | 183.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 901 | 183.78 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 19 | NA |
| 905 | 183.78 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 938 | 183.80 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 940 | 183.80 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 954 | 183.81 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 7 |