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Os01g0281100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0444) R2 : 0.944
β1 : -- (--) R2dD : -- R2D : --
β2 : 9.03 (0.112) R2dC : 0.808 R2C : 0.844
β3 : -3.33 (0.118) R2dE : 0.0992 R2E : 0.136
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.101 (0.0932) R2dN8 : 0.000184 R2N8 : -0.00533
σ : 0.832
deviance : 318.95
__
_____
C
peak time of C : 8.44
E
wheather : temperature
threshold : 20.5
memory length : 69
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 23.3
open length of G : 4.88

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
317.03 0.837 10.8 -0.25 9.02 -3.29 1.23 0.798 -0.122 8.43 20.4 89 23 5
314.48 0.826 10.8 -0.312 9.02 -3.29 1.18 -- -0.129 8.44 20.59 79 23.2 4.92
320.18 0.833 10.8 -0.238 9.04 -3.33 -- 0.372 -0.103 8.44 20.5 88 23.1 4.92
316.92 0.829 10.8 -0.293 9.02 -3.29 -- -- -0.129 8.46 20.5 69 23.3 4.87
3612.54 2.81 11.1 -0.618 -- -4.91 -- -1.11 -0.216 -- 14.4 21 21.7 6.1
655.85 1.2 10.9 -0.537 9.28 -- 1.61 -- -0.178 9.22 -- -- -- --
665.12 1.21 10.9 -0.48 9.28 -- -- -- -0.176 9.21 -- -- -- --
1204.42 1.62 11.7 0.909 -- -7.47 -- -- -0.0671 -- 18.79 229 14.8 11.1
318.95 0.832 10.8 -- 9.03 -3.33 -- -- -0.101 8.44 20.5 69 23.3 4.88
5659.74 3.52 11.1 -0.514 -- -- -- -- -0.132 -- -- -- -- --
671.19 1.21 10.8 -- 9.28 -- -- -- -0.123 9.22 -- -- -- --
724.37 1.25 11.1 -- -- -7.61 -- -- -0.226 -- 10.43 186 13.4 13.3
5666.7 3.51 11.1 -- -- -- -- -- -0.0746 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 322.89 temperature 20.0 90 > th dose independent rect. 23 5
2 330.49 temperature 15.0 90 > th dose dependent rect. 23 5
3 347.12 temperature 20.0 270 > th dose independent rect. 23 2
5 349.46 temperature 15.0 270 > th dose dependent rect. 23 2
8 357.56 temperature 20.0 10 > th dose independent rect. 23 6
9 359.92 temperature 10.0 90 > th dose dependent rect. 19 9
11 362.48 temperature 15.0 10 > th dose dependent rect. 23 6
12 363.21 temperature 20.0 90 > th dose independent rect. 7 21
29 379.36 temperature 20.0 90 > th dose independent rect. 19 9
37 383.07 temperature 20.0 10 > th dose independent rect. 8 21
45 391.57 temperature 10.0 10 > th dose dependent rect. 20 9
46 392.12 temperature 20.0 10 > th dose independent rect. 20 9
61 398.11 radiation 40.0 90 < th dose dependent rect. 4 5
65 400.41 radiation 1.0 10 < th dose dependent sin 10 NA
71 402.26 radiation 40.0 10 < th dose dependent rect. 5 4
75 403.01 radiation 40.0 90 < th dose dependent rect. 4 7
76 403.34 radiation 20.0 90 < th dose independent rect. 4 5
84 406.29 humidity 50.0 90 > th dose dependent rect. 4 5
92 408.53 wind 9.0 90 < th dose independent rect. 7 21
97 409.21 wind 7.0 90 < th dose independent rect. 4 3
98 409.22 precipitation 0.1 90 < th dose independent rect. 4 3
99 409.22 precipitation 0.1 90 < th dose dependent rect. 4 3
101 409.38 temperature 10.0 90 > th dose independent rect. 4 3
103 409.38 temperature 30.0 90 < th dose independent rect. 4 3
104 409.38 humidity 50.0 90 > th dose independent rect. 4 3
106 409.38 atmosphere 995.0 90 > th dose independent rect. 4 3
107 409.38 atmosphere 1015.0 90 < th dose independent rect. 4 3
108 409.38 radiation 40.0 90 < th dose independent rect. 4 3
111 409.83 temperature 10.0 90 > th dose dependent rect. 7 21
112 409.93 humidity 50.0 90 > th dose dependent rect. 4 7
116 410.53 wind 9.0 90 < th dose dependent rect. 4 3
118 410.75 humidity 50.0 10 > th dose dependent rect. 5 4
119 411.03 humidity 50.0 90 > th dose dependent rect. 4 3
138 415.25 wind 7.0 10 < th dose dependent rect. 5 4
146 416.15 temperature 20.0 90 > th dose independent rect. 11 17
149 416.25 atmosphere 1015.0 90 < th dose independent rect. 7 21
154 416.80 wind 9.0 90 < th dose dependent rect. 4 5
158 417.06 radiation 20.0 10 < th dose independent rect. 5 4
159 417.08 precipitation 0.1 90 < th dose independent rect. 7 21
160 417.08 precipitation 0.1 90 < th dose dependent rect. 7 21
171 418.35 wind 9.0 10 < th dose dependent rect. 5 2
174 418.78 humidity 80.0 90 > th dose independent rect. 23 5
177 419.36 precipitation 0.1 10 < th dose independent rect. 5 2
178 419.36 precipitation 0.1 10 < th dose dependent rect. 5 2
179 419.42 wind 7.0 10 < th dose independent rect. 5 2
181 419.42 temperature 10.0 10 > th dose independent rect. 5 2
183 419.42 temperature 30.0 10 < th dose independent rect. 5 2
184 419.42 humidity 50.0 10 > th dose independent rect. 5 2
187 419.42 atmosphere 995.0 10 > th dose independent rect. 5 2
188 419.42 atmosphere 1015.0 10 < th dose independent rect. 5 2
195 419.70 wind 9.0 10 < th dose independent rect. 7 22
205 420.48 temperature 10.0 10 > th dose dependent rect. 7 22
217 422.20 radiation 30.0 10 < th dose dependent rect. 5 6
219 422.35 temperature 10.0 90 > th dose dependent rect. 4 3
240 423.89 humidity 50.0 90 > th dose dependent rect. 19 9
245 424.29 humidity 50.0 90 > th dose dependent rect. 23 5
262 425.57 temperature 10.0 10 > th dose dependent rect. 5 2
293 426.39 atmosphere 1015.0 10 < th dose independent rect. 7 22
295 426.52 atmosphere 995.0 90 > th dose independent rect. 7 21
309 427.56 wind 3.0 10 < th dose independent rect. 5 4
315 427.70 radiation 20.0 90 < th dose independent rect. 4 7
317 427.88 radiation 1.0 10 > th dose independent sin 10 NA
335 428.20 atmosphere 1010.0 90 < th dose independent rect. 23 5
342 428.61 wind 9.0 90 < th dose dependent rect. 19 9
350 429.11 precipitation 0.1 10 < th dose independent rect. 7 22
351 429.11 precipitation 0.1 10 < th dose dependent rect. 7 22
376 429.94 atmosphere 1015.0 90 < th dose dependent rect. 4 3
415 430.71 wind 9.0 90 < th dose independent rect. 19 9
419 430.90 radiation 1.0 10 < th dose independent sin 10 NA
420 430.93 radiation 1.0 90 < th dose dependent rect. 19 9
422 430.95 temperature 30.0 90 < th dose independent rect. 19 9
423 430.95 humidity 50.0 90 > th dose independent rect. 19 9
425 430.95 atmosphere 995.0 90 > th dose independent rect. 19 9
426 430.95 radiation 1.0 90 < th dose independent rect. 19 9
431 430.95 temperature 10.0 90 > th dose independent rect. 4 15
432 430.95 atmosphere 1015.0 90 < th dose independent rect. 4 15
460 432.99 humidity 50.0 10 > th dose dependent rect. 20 9
466 433.48 humidity 80.0 270 > th dose independent rect. 23 2
468 433.53 wind 9.0 270 < th dose dependent rect. 23 2
469 433.65 atmosphere 995.0 10 > th dose independent rect. 7 22
473 433.80 atmosphere 1010.0 270 < th dose independent rect. 23 2
479 433.97 temperature 10.0 1440 > th dose independent rect. 5 5
482 433.97 atmosphere 995.0 1440 > th dose independent rect. 5 5
483 433.97 atmosphere 1015.0 1440 < th dose independent rect. 5 5
484 433.97 temperature 10.0 1440 > th dose independent rect. 10 19
487 433.97 humidity 50.0 270 > th dose dependent rect. 23 2
516 434.64 precipitation 0.1 90 < th dose independent rect. 4 15
517 434.64 precipitation 0.1 90 < th dose dependent rect. 4 15
523 434.99 humidity 50.0 90 > th dose dependent rect. 21 7
531 435.65 precipitation 0.1 90 < th dose independent rect. 19 9
532 435.65 precipitation 0.1 90 < th dose dependent rect. 19 9
537 435.94 temperature 30.0 90 < th dose independent rect. 23 5
538 435.94 humidity 50.0 90 > th dose independent rect. 23 5
541 435.94 atmosphere 995.0 90 > th dose independent rect. 23 5
542 435.94 radiation 1.0 90 < th dose independent rect. 23 5
547 435.94 temperature 10.0 90 > th dose independent rect. 4 19
548 435.94 radiation 1.0 90 < th dose dependent rect. 23 5
553 436.04 wind 9.0 90 < th dose independent rect. 23 5
570 437.00 wind 9.0 90 < th dose independent rect. 4 15
580 437.98 wind 9.0 1440 < th dose independent rect. 5 3
581 437.98 temperature 10.0 1440 > th dose independent rect. 5 3
584 437.98 temperature 30.0 1440 < th dose independent rect. 5 3
588 437.98 humidity 50.0 1440 > th dose independent rect. 5 3
593 437.98 atmosphere 995.0 1440 > th dose independent rect. 5 3
594 437.98 atmosphere 1015.0 1440 < th dose independent rect. 5 3
595 437.98 temperature 10.0 1440 > th dose independent rect. 8 21
606 438.55 wind 7.0 270 < th dose independent rect. 23 2
607 438.56 precipitation 0.1 270 < th dose independent rect. 23 2
608 438.56 precipitation 0.1 270 < th dose dependent rect. 23 2
614 438.77 temperature 30.0 270 < th dose independent rect. 23 2
615 438.77 humidity 50.0 270 > th dose independent rect. 23 2
618 438.77 atmosphere 995.0 270 > th dose independent rect. 23 2
619 438.77 radiation 1.0 270 < th dose independent rect. 23 2
624 438.77 temperature 10.0 270 > th dose independent rect. 1 22
625 438.77 radiation 1.0 270 < th dose dependent rect. 23 2
651 440.24 wind 9.0 90 < th dose dependent rect. 23 5
672 440.55 precipitation 0.1 90 < th dose independent rect. 23 5
673 440.55 precipitation 0.1 90 < th dose dependent rect. 23 5
677 440.91 atmosphere 1015.0 10 < th dose dependent rect. 5 2
709 442.96 wind 9.0 90 < th dose independent rect. 4 19
710 443.06 humidity 50.0 90 > th dose dependent rect. 4 9
721 444.06 atmosphere 995.0 90 > th dose dependent rect. 4 3
725 444.47 atmosphere 1015.0 90 < th dose independent rect. 19 9
732 444.93 atmosphere 995.0 10 > th dose dependent rect. 5 2
735 445.23 precipitation 0.1 90 < th dose independent rect. 4 19
736 445.23 precipitation 0.1 90 < th dose dependent rect. 4 19
744 445.74 atmosphere 995.0 90 > th dose independent rect. 4 15
773 447.30 atmosphere 1015.0 90 < th dose independent rect. 4 19
777 447.52 humidity 50.0 90 > th dose independent rect. 7 21
778 447.57 wind 7.0 90 < th dose dependent rect. 4 7
791 448.18 radiation 1.0 10 > th dose independent rect. 5 2
819 448.79 wind 9.0 10 < th dose dependent rect. 20 9
834 449.03 radiation 1.0 10 < th dose dependent rect. 20 9
844 449.52 atmosphere 1015.0 90 < th dose dependent rect. 23 5
846 449.63 temperature 30.0 90 < th dose dependent rect. 4 3
848 449.64 atmosphere 1010.0 10 < th dose independent rect. 23 6
857 450.13 wind 9.0 270 < th dose independent rect. 1 22
889 451.42 radiation 40.0 90 < th dose dependent rect. 4 19
898 451.87 humidity 80.0 90 > th dose independent rect. 21 7
905 452.15 wind 9.0 10 < th dose independent rect. 20 9
920 452.65 radiation 40.0 270 < th dose dependent rect. 2 7
923 452.68 temperature 30.0 10 < th dose independent rect. 20 9
924 452.68 humidity 50.0 10 > th dose independent rect. 20 9
927 452.68 atmosphere 995.0 10 > th dose independent rect. 20 9
928 452.68 radiation 1.0 10 < th dose independent rect. 20 9
933 452.68 temperature 10.0 10 > th dose independent rect. 5 15
935 452.68 atmosphere 1015.0 10 < th dose independent rect. 5 15
939 452.77 precipitation 0.1 270 < th dose independent rect. 1 22
941 452.77 precipitation 0.1 270 < th dose dependent rect. 1 22
945 453.07 wind 9.0 90 < th dose independent rect. 21 7
947 453.09 radiation 1.0 90 < th dose dependent rect. 21 7
950 453.10 temperature 30.0 90 < th dose independent rect. 21 7
951 453.10 humidity 50.0 90 > th dose independent rect. 21 7
954 453.10 atmosphere 995.0 90 > th dose independent rect. 21 7
955 453.10 radiation 1.0 90 < th dose independent rect. 21 7
960 453.10 temperature 10.0 90 > th dose independent rect. 4 17
961 453.10 atmosphere 1015.0 90 < th dose independent rect. 4 17
974 453.43 radiation 30.0 10 < th dose dependent rect. 5 19
977 453.53 wind 9.0 90 < th dose dependent rect. 4 15
980 453.88 atmosphere 995.0 90 > th dose independent rect. 4 19
987 454.28 radiation 10.0 10 < th dose independent rect. 5 19