Os01g0266600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Redoxin domain containing protein.
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Os01g0266600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Redoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.81 | 0.375 | 12.4 | -0.481 | 0.745 | -1.2 | -0.848 | -0.0139 | -0.636 | 20.5 | 46.21 | 1140 | -- | -- |
| 63.81 | 0.372 | 12.4 | -0.482 | 0.745 | -1.22 | -0.854 | -- | -0.637 | 20.5 | 45 | 1140 | -- | -- |
| 65.95 | 0.378 | 12.4 | -0.489 | 0.745 | -1.23 | -- | 0.354 | -0.641 | 20.5 | 45.42 | 1140 | -- | -- |
| 66.11 | 0.379 | 12.4 | -0.453 | 0.753 | -1.19 | -- | -- | -0.635 | 20.5 | 46.74 | 1143 | -- | -- |
| 73.63 | 0.4 | 12.4 | -0.442 | -- | -1.65 | -- | 0.477 | -0.72 | -- | 66.37 | 846 | -- | -- |
| 89.72 | 0.444 | 12.4 | -0.407 | 0.946 | -- | -0.637 | -- | -0.597 | 21.5 | -- | -- | -- | -- |
| 91.22 | 0.447 | 12.4 | -0.384 | 0.948 | -- | -- | -- | -0.596 | 21.5 | -- | -- | -- | -- |
| 73.88 | 0.4 | 12.4 | -0.392 | -- | -1.62 | -- | -- | -0.729 | -- | 67.11 | 846 | -- | -- |
| 70.85 | 0.392 | 12.4 | -- | 0.819 | -1.17 | -- | -- | -0.656 | 20.5 | 63 | 1198 | -- | -- |
| 144.16 | 0.561 | 12.4 | -0.377 | -- | -- | -- | -- | -0.598 | -- | -- | -- | -- | -- |
| 95.1 | 0.456 | 12.4 | -- | 0.947 | -- | -- | -- | -0.553 | 21.5 | -- | -- | -- | -- |
| 77.74 | 0.411 | 12.4 | -- | -- | -1.61 | -- | -- | -0.7 | -- | 70 | 839 | -- | -- |
| 147.91 | 0.568 | 12.4 | -- | -- | -- | -- | -- | -0.557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.73 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 16 |
| 3 | 60.77 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 17 |
| 28 | 61.33 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 35 | 61.42 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 46 | 61.58 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 84 | 62.10 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 88 | 62.16 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 173 | 63.56 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 265 | 64.64 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 278 | 64.78 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 279 | 64.78 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 280 | 64.78 | humidity | 90 | 1440 | < th | dose dependent | rect. | 12 | 4 |
| 298 | 64.85 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 315 | 64.92 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 319 | 64.93 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 355 | 65.02 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 370 | 65.08 | humidity | 70 | 1440 | > th | dose dependent | sin | 22 | NA |
| 416 | 65.27 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 421 | 65.29 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 443 | 65.38 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 507 | 65.56 | humidity | 60 | 1440 | > th | dose dependent | rect. | 1 | 21 |
| 543 | 65.65 | humidity | 50 | 1440 | > th | dose dependent | rect. | 23 | 19 |
| 557 | 65.67 | humidity | 50 | 1440 | > th | dose dependent | rect. | 24 | 17 |
| 593 | 65.72 | humidity | 90 | 1440 | < th | dose dependent | rect. | 20 | 21 |
| 602 | 65.74 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 686 | 65.85 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 802 | 66.05 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 847 | 66.11 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 22 |
| 938 | 66.25 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 954 | 66.27 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 986 | 66.31 | humidity | 90 | 1440 | < th | dose dependent | sin | 21 | NA |
| 992 | 66.31 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |