Os01g0263500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0263500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.42 | 0.152 | 10.7 | 0.0753 | 0.157 | 0.768 | -0.154 | 0.635 | -0.093 | 6.94 | 10.12 | 100 | -- | -- |
| 10.72 | 0.153 | 10.7 | -0.0173 | 0.158 | 0.792 | -0.206 | -- | -0.119 | 6.71 | 12.32 | 104 | -- | -- |
| 10.47 | 0.151 | 10.7 | 0.0776 | 0.161 | 0.779 | -- | 0.679 | -0.0917 | 6.84 | 9.807 | 106 | -- | -- |
| 10.83 | 0.153 | 10.7 | -0.0202 | 0.157 | 0.792 | -- | -- | -0.119 | 6.85 | 10.99 | 104 | -- | -- |
| 11.41 | 0.158 | 10.7 | 0.0803 | -- | 0.703 | -- | 0.536 | -0.0866 | -- | 9.807 | 106 | -- | -- |
| 16.93 | 0.193 | 10.7 | 0.139 | 0.183 | -- | 0.0942 | -- | -0.00866 | 12.5 | -- | -- | -- | -- |
| 16.97 | 0.193 | 10.7 | 0.142 | 0.183 | -- | -- | -- | -0.00836 | 12.3 | -- | -- | -- | -- |
| 11.66 | 0.159 | 10.7 | 0.00486 | -- | 0.721 | -- | -- | -0.108 | -- | 5.352 | 8 | -- | -- |
| 10.84 | 0.153 | 10.7 | -- | 0.156 | 0.782 | -- | -- | -0.115 | 6.92 | 11.48 | 104 | -- | -- |
| 19.07 | 0.204 | 10.7 | 0.136 | -- | -- | -- | -- | -0.0113 | -- | -- | -- | -- | -- |
| 17.5 | 0.196 | 10.7 | -- | 0.181 | -- | -- | -- | -0.0242 | 12.3 | -- | -- | -- | -- |
| 11.66 | 0.159 | 10.7 | -- | -- | 0.723 | -- | -- | -0.108 | -- | 2.407 | 7 | -- | -- |
| 19.56 | 0.206 | 10.7 | -- | -- | -- | -- | -- | -0.0264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.01 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 7 | 10.44 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 10 | 10.46 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 12 | 10.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 22 |
| 13 | 10.51 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 26 | 10.61 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 36 | 10.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 73 | 10.81 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 106 | 10.91 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 110 | 10.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 111 | 10.92 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 114 | 10.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 126 | 10.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 127 | 10.97 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 138 | 10.99 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 149 | 11.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 175 | 11.06 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 231 | 11.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 238 | 11.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 259 | 11.31 | temperature | 10 | 10 | > th | dose dependent | sin | 18 | NA |
| 299 | 11.36 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 14 |
| 372 | 11.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 374 | 11.48 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 452 | 11.60 | temperature | 30 | 10 | < th | dose dependent | sin | 18 | NA |
| 554 | 11.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 13 |
| 656 | 11.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 14 |
| 927 | 12.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 944 | 12.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 17 |