Os01g0260100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Kinesin heavy chain (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0260100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Kinesin heavy chain (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 569.93 | 1.12 | 4.01 | -0.69 | 0.446 | 2.11 | -1.43 | 0.267 | -0.653 | 16.1 | 86.13 | 1311 | -- | -- |
| 569.98 | 1.11 | 4.01 | -0.724 | 0.447 | 2.13 | -1.44 | -- | -0.652 | 16.1 | 85.64 | 1309 | -- | -- |
| 574.84 | 1.12 | 4.01 | -0.714 | 0.492 | 2.18 | -- | 0.464 | -0.651 | 15 | 85.62 | 1286 | -- | -- |
| 575.1 | 1.12 | 4.01 | -0.765 | 0.473 | 2.19 | -- | -- | -0.648 | 14.9 | 84.79 | 1285 | -- | -- |
| 582.33 | 1.12 | 4.01 | -0.672 | -- | 1.97 | -- | 0.491 | -0.645 | -- | 85.58 | 1457 | -- | -- |
| 674.05 | 1.22 | 4.02 | -0.46 | 0.193 | -- | -1.88 | -- | -0.676 | 16.7 | -- | -- | -- | -- |
| 683.28 | 1.22 | 4.02 | -0.471 | 0.185 | -- | -- | -- | -0.686 | 17.3 | -- | -- | -- | -- |
| 582.52 | 1.12 | 4.01 | -0.744 | -- | 2.01 | -- | -- | -0.649 | -- | 85 | 1456 | -- | -- |
| 588.87 | 1.13 | 4 | -- | 0.474 | 2.11 | -- | -- | -0.616 | 15 | 88.23 | 1291 | -- | -- |
| 685.07 | 1.22 | 4.02 | -0.477 | -- | -- | -- | -- | -0.69 | -- | -- | -- | -- | -- |
| 689.12 | 1.23 | 4.01 | -- | 0.193 | -- | -- | -- | -0.633 | 17.2 | -- | -- | -- | -- |
| 595.52 | 1.14 | 4 | -- | -- | 1.91 | -- | -- | -0.612 | -- | 88.3 | 1493 | -- | -- |
| 691.07 | 1.23 | 4.01 | -- | -- | -- | -- | -- | -0.637 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 556.37 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 10 | 559.76 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 15 | 560.25 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 41 | 562.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 47 | 562.68 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |
| 52 | 563.26 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 54 | 563.33 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 60 | 564.04 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 111 | 565.71 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 140 | 566.28 | radiation | 30 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 151 | 566.82 | humidity | 60 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 154 | 566.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 159 | 567.02 | radiation | 30 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 192 | 567.39 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 17 |
| 208 | 567.73 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 229 | 567.95 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 242 | 568.05 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 243 | 568.06 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 248 | 568.12 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 251 | 568.15 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 254 | 568.16 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 298 | 568.67 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 321 | 569.17 | temperature | 30 | 1440 | > th | dose dependent | sin | 11 | NA |
| 417 | 569.99 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 422 | 570.01 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 442 | 570.39 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 475 | 570.80 | radiation | 30 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 484 | 570.86 | humidity | 50 | 1440 | > th | dose dependent | sin | 17 | NA |
| 498 | 571.00 | radiation | 30 | 1440 | < th | dose independent | rect. | 19 | 13 |
| 560 | 571.50 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 565 | 571.55 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 19 |
| 586 | 571.66 | humidity | 60 | 1440 | < th | dose independent | sin | 13 | NA |
| 598 | 571.69 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 17 |
| 609 | 571.76 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 612 | 571.80 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 636 | 571.98 | radiation | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 638 | 571.98 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 639 | 572.00 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 715 | 572.65 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 16 |
| 751 | 572.88 | humidity | 50 | 1440 | > th | dose independent | sin | 12 | NA |
| 766 | 573.04 | humidity | 50 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 770 | 573.09 | humidity | 50 | 1440 | > th | dose independent | rect. | 13 | 4 |
| 777 | 573.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 806 | 573.46 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 865 | 573.75 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 874 | 573.81 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 911 | 574.02 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 924 | 574.10 | humidity | 50 | 1440 | > th | dose dependent | rect. | 14 | 20 |
| 925 | 574.11 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 991 | 574.31 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 7 |