Os01g0259900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0259900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.2 | 0.456 | 8.38 | 1.65 | 1.08 | -2 | -1.97 | 2.55 | -0.0478 | 19.1 | 8.212 | 520 | -- | -- |
| 98.04 | 0.461 | 8.43 | 1.24 | 1.08 | -1.96 | -1.39 | -- | -0.16 | 19.2 | -10.66 | 546 | -- | -- |
| 103.94 | 0.475 | 8.39 | 1.68 | 1.05 | -2.04 | -- | 2.33 | -0.0555 | 19 | 7.677 | 489 | -- | -- |
| 103.16 | 0.473 | 8.43 | 1.28 | 1.09 | -2.01 | -- | -- | -0.151 | 19.3 | -3.238 | 556 | -- | -- |
| 124.59 | 0.52 | 8.35 | 1.79 | -- | -1.38 | -- | 1.62 | -0.0696 | -- | -1.246 | 2864 | -- | -- |
| 142.58 | 0.56 | 8.48 | 0.782 | 0.564 | -- | -1.75 | -- | -0.454 | 19.2 | -- | -- | -- | -- |
| 150.46 | 0.574 | 8.49 | 0.815 | 0.56 | -- | -- | -- | -0.459 | 19.6 | -- | -- | -- | -- |
| 125.86 | 0.523 | 8.41 | 1.3 | -- | -1.55 | -- | -- | -0.18 | -- | 3.367 | 1418 | -- | -- |
| 141.68 | 0.554 | 8.48 | -- | 0.93 | -1.44 | -- | -- | -0.372 | 19.2 | -0.8536 | 482 | -- | -- |
| 167.26 | 0.604 | 8.47 | 0.807 | -- | -- | -- | -- | -0.467 | -- | -- | -- | -- | -- |
| 167.98 | 0.606 | 8.51 | -- | 0.553 | -- | -- | -- | -0.549 | 19.7 | -- | -- | -- | -- |
| 164.47 | 0.597 | 8.46 | -- | -- | -1 | -- | -- | -0.407 | -- | -3.012 | 1384 | -- | -- |
| 184.44 | 0.634 | 8.49 | -- | -- | -- | -- | -- | -0.557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.21 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 9 | 93.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 10 | 94.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 13 | 94.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 19 |
| 33 | 95.07 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 90 | 96.41 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 91 | 96.44 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 99 | 96.54 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 114 | 96.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 146 | 97.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 22 |
| 149 | 97.33 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 169 | 97.69 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 173 | 97.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 11 |
| 190 | 97.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 216 | 98.20 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 238 | 98.43 | temperature | 10 | 270 | > th | dose dependent | sin | 20 | NA |
| 263 | 98.62 | temperature | 10 | 720 | > th | dose dependent | sin | 1 | NA |
| 297 | 98.97 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 350 | 99.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 353 | 99.42 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 366 | 99.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 391 | 99.67 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 403 | 99.70 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 475 | 99.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 586 | 99.94 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 655 | 100.02 | temperature | 30 | 270 | < th | dose dependent | sin | 20 | NA |
| 729 | 100.14 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 779 | 100.23 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 853 | 100.39 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 876 | 100.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 17 |