FiT-DB / Search/ Help/ Sample detail

Os01g0259600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (PAPS reductase, thioredoxin dependent) (PAdoPS reductase) (3'- phosphoadenylylsulfate reductase) (PAPS sulfotransferase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.7 (0.0147) R2 : 0.769
β1 : -0.99 (0.0539) R2dD : 0.177 R2D : 0.165
β2 : 1.21 (0.035) R2dC : 0.604 R2C : 0.592
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.000706 (0.0314) R2dN8 : 3.42e-07 R2N8 : -0.00215
σ : 0.277
deviance : 34.95
__
_____
C
peak time of C : 23.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.44 0.251 14.7 -0.982 0.558 0.569 -0.613 0.264 0.0149 22.5 1.271 45 -- --
28.56 0.249 14.7 -0.989 0.529 0.594 -0.45 -- 0.0107 22.4 1.255 51 -- --
28.76 0.25 14.7 -0.944 0.525 0.59 -- -0.161 -0.000495 22.6 1.268 48 -- --
28.9 0.25 14.7 -0.966 0.547 0.57 -- -- 0.0137 22.6 1.293 48 -- --
33.81 0.271 14.7 -0.936 -- 0.936 -- -0.243 0.0309 -- 1.444 48 -- --
34.66 0.276 14.7 -1 1.21 -- -0.262 -- -0.0016 23.4 -- -- -- --
34.95 0.277 14.7 -0.99 1.21 -- -- -- -0.000706 23.4 -- -- -- --
34.15 0.272 14.7 -0.937 -- 0.932 -- -- 0.027 -- 1.434 43 -- --
53.28 0.34 14.7 -- 0.568 0.557 -- -- 0.0115 22.7 0.2062 38 -- --
126.22 0.525 14.7 -0.959 -- -- -- -- 0.0113 -- -- -- -- --
60.81 0.365 14.7 -- 1.2 -- -- -- 0.11 23.3 -- -- -- --
56.66 0.351 14.7 -- -- 0.937 -- -- 0.118 -- 0.5698 40 -- --
150.49 0.573 14.7 -- -- -- -- -- 0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.96 humidity 70.0 90 > th dose independent rect. 17 12
2 28.11 radiation 10.0 30 < th dose dependent sin 11 NA
3 28.12 radiation 1.0 30 > th dose independent rect. 17 16
6 28.27 radiation 1.0 90 < th dose dependent rect. 20 23
8 28.35 temperature 30.0 90 < th dose independent rect. 17 12
9 28.36 radiation 1.0 90 < th dose independent sin 12 NA
12 28.39 temperature 30.0 270 < th dose independent rect. 15 12
13 28.40 radiation 1.0 90 > th dose independent rect. 18 13
20 28.57 radiation 1.0 90 < th dose independent rect. 20 23
23 28.68 radiation 1.0 90 > th dose independent rect. 5 2
24 28.68 temperature 30.0 90 < th dose independent rect. 8 21
34 28.69 humidity 50.0 270 > th dose independent rect. 15 12
36 28.71 radiation 1.0 90 > th dose independent sin 12 NA
37 28.71 radiation 10.0 720 < th dose independent rect. 17 2
43 28.77 radiation 1.0 30 > th dose independent rect. 14 19
44 28.77 humidity 70.0 90 > th dose independent rect. 9 20
45 28.78 radiation 1.0 30 < th dose dependent rect. 11 19
53 28.80 radiation 1.0 30 < th dose dependent rect. 13 17
61 28.85 humidity 70.0 90 > th dose independent rect. 13 16
62 28.85 humidity 50.0 90 > th dose independent rect. 7 22
66 28.89 radiation 1.0 30 < th dose dependent no NA NA
74 28.89 radiation 1.0 30 < th dose dependent rect. 13 23
75 28.89 radiation 1.0 30 < th dose dependent rect. 15 23
76 28.90 radiation 1.0 30 < th dose dependent rect. 17 23
77 28.92 radiation 1.0 30 > th dose dependent rect. 17 14
88 28.94 radiation 1.0 90 < th dose independent rect. 9 20
93 28.95 temperature 15.0 90 > th dose dependent rect. 5 2
100 28.99 radiation 1.0 30 > th dose independent rect. 12 21
104 29.00 radiation 1.0 30 < th dose dependent rect. 15 15
137 29.07 wind 3.0 90 < th dose independent rect. 5 2
141 29.07 wind 5.0 90 < th dose dependent rect. 5 2
153 29.10 radiation 1.0 90 < th dose independent rect. 15 14
154 29.10 humidity 70.0 10 > th dose independent rect. 12 17
196 29.15 humidity 50.0 720 > th dose independent rect. 16 3
197 29.15 humidity 70.0 10 > th dose independent rect. 9 20
204 29.16 temperature 20.0 30 > th dose dependent rect. 22 7
224 29.18 temperature 20.0 90 > th dose independent rect. 5 2
225 29.18 humidity 70.0 90 > th dose independent rect. 11 18
229 29.18 humidity 50.0 30 > th dose dependent rect. 9 20
231 29.19 radiation 1.0 90 < th dose independent rect. 17 12
253 29.22 temperature 20.0 90 > th dose dependent rect. 20 9
271 29.24 radiation 40.0 270 < th dose dependent rect. 15 12
294 29.26 atmosphere 995.0 90 > th dose independent rect. 7 22
306 29.28 temperature 20.0 30 > th dose dependent rect. 18 11
314 29.30 precipitation 0.1 90 < th dose independent rect. 5 2
318 29.30 precipitation 0.1 90 < th dose dependent rect. 5 2
331 29.32 temperature 10.0 90 > th dose independent rect. 5 2
333 29.32 temperature 30.0 90 < th dose independent rect. 5 2
334 29.32 humidity 50.0 90 > th dose independent rect. 5 2
336 29.32 atmosphere 995.0 90 > th dose independent rect. 5 2
337 29.32 atmosphere 1015.0 90 < th dose independent rect. 5 2
338 29.32 radiation 40.0 90 < th dose independent rect. 5 2
340 29.32 temperature 10.0 90 > th dose independent rect. 7 22
348 29.34 radiation 1.0 30 < th dose independent no NA NA
357 29.34 radiation 1.0 30 < th dose independent rect. 13 23
358 29.34 radiation 1.0 30 < th dose independent rect. 15 23
364 29.35 radiation 1.0 30 > th dose independent no NA NA
375 29.35 radiation 1.0 30 > th dose independent rect. 5 14
432 29.35 radiation 1.0 30 < th dose independent rect. 17 23
436 29.36 temperature 30.0 10 < th dose independent rect. 9 20
468 29.40 radiation 1.0 30 > th dose independent rect. 10 23
475 29.41 atmosphere 1015.0 90 < th dose independent rect. 8 21
534 29.47 humidity 50.0 720 > th dose independent rect. 7 20
537 29.48 humidity 50.0 270 > th dose independent rect. 7 12
555 29.50 humidity 50.0 90 > th dose dependent rect. 5 2
563 29.52 atmosphere 995.0 90 > th dose dependent rect. 5 3
577 29.54 radiation 10.0 720 < th dose independent rect. 17 10
586 29.55 radiation 1.0 30 < th dose independent rect. 15 21
608 29.58 wind 9.0 90 < th dose independent rect. 7 22
610 29.58 radiation 1.0 30 > th dose independent rect. 17 23
611 29.58 radiation 10.0 720 < th dose dependent rect. 17 2
706 29.61 radiation 40.0 90 < th dose dependent rect. 5 2
715 29.63 temperature 30.0 270 < th dose independent rect. 7 12
720 29.63 humidity 50.0 90 > th dose dependent rect. 17 12
726 29.64 humidity 60.0 720 > th dose independent rect. 24 19
788 29.69 temperature 30.0 90 < th dose independent rect. 11 18
797 29.70 temperature 20.0 30 > th dose independent rect. 20 9
807 29.71 precipitation 0.1 90 < th dose independent rect. 7 22
812 29.71 precipitation 0.1 90 < th dose dependent rect. 7 22
833 29.73 temperature 20.0 30 > th dose independent rect. 22 7
838 29.73 radiation 1.0 90 > th dose dependent rect. 5 2
880 29.76 temperature 20.0 30 > th dose independent rect. 18 11
897 29.76 radiation 30.0 90 < th dose dependent rect. 11 18
965 29.83 temperature 25.0 720 > th dose independent rect. 18 1