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Os01g0256600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ribosomal protein L18P/L5E family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0148) R2 : 0.0388
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.134 (0.0312) R2dN8 : 0.0501 R2N8 : 0.0388
σ : 0.279
deviance : 35.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.87 0.239 11.9 -0.282 0.253 -0.368 -0.785 0.341 0.12 10.1 0.14 95 -- --
26.08 0.238 11.9 -0.279 0.245 -0.353 -0.441 -- 0.124 9.79 0.13 97 -- --
27.18 0.245 11.9 -0.336 0.209 -0.212 -- -0.204 0.089 6.92 0.1399 89 -- --
26.79 0.241 11.9 -0.309 0.258 -0.363 -- -- 0.125 10.2 0.1369 95 -- --
27.93 0.246 11.9 -0.351 -- -0.214 -- -0.203 0.104 -- 0.05 112 -- --
28.57 0.251 11.9 -0.345 0.263 -- 0.187 -- 0.0909 2.57 -- -- -- --
28.68 0.251 11.9 -0.35 0.266 -- -- -- 0.0896 2.82 -- -- -- --
28.13 0.247 11.9 -0.333 -- -0.221 -- -- 0.103 -- 0.05161 155 -- --
29.48 0.253 11.9 -- 0.254 -0.374 -- -- 0.142 10.4 0.05 95 -- --
32.78 0.268 11.9 -0.338 -- -- -- -- 0.0964 -- -- -- -- --
31.9 0.264 11.9 -- 0.259 -- -- -- 0.128 2.81 -- -- -- --
30.92 0.259 11.9 -- -- -0.238 -- -- 0.134 -- 0.009996 188 -- --
35.8 0.279 11.9 -- -- -- -- -- 0.134 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.18 temperature 15 30 > th dose dependent rect. 19 10
3 25.28 temperature 20 90 > th dose independent rect. 18 11
16 25.48 temperature 10 270 > th dose dependent rect. 17 9
27 25.70 radiation 40 10 < th dose independent rect. 5 14
30 25.74 radiation 1 90 < th dose dependent rect. 18 23
32 25.76 radiation 1 90 < th dose dependent rect. 18 21
34 25.78 atmosphere 1000 30 > th dose independent rect. 5 13
46 25.86 temperature 20 90 > th dose independent rect. 5 13
50 25.89 radiation 1 90 < th dose dependent rect. 3 23
51 25.90 radiation 1 90 < th dose dependent rect. 18 17
61 25.95 temperature 30 30 < th dose independent rect. 5 13
62 25.95 radiation 1 90 < th dose independent rect. 18 21
66 25.96 radiation 1 90 < th dose independent rect. 18 23
70 25.97 radiation 1 90 > th dose independent rect. 10 23
79 26.02 temperature 30 30 < th dose independent rect. 18 11
88 26.05 temperature 15 10 > th dose dependent rect. 9 20
89 26.05 radiation 1 90 < th dose dependent rect. 12 23
90 26.06 radiation 1 90 < th dose dependent no NA NA
98 26.06 radiation 1 90 < th dose dependent rect. 9 23
100 26.07 temperature 30 14400 > th dose dependent rect. 8 1
111 26.07 atmosphere 1015 90 < th dose dependent rect. 19 10
117 26.08 atmosphere 1010 90 < th dose independent rect. 18 11
118 26.08 radiation 1 90 < th dose independent rect. 18 17
129 26.09 temperature 25 270 > th dose dependent rect. 18 17
155 26.13 atmosphere 995 10 > th dose dependent rect. 23 10
158 26.14 temperature 25 270 > th dose dependent sin 9 NA
174 26.16 temperature 10 90 > th dose dependent rect. 9 14
175 26.16 radiation 1 90 < th dose dependent rect. 6 23
177 26.17 temperature 25 270 < th dose independent sin 9 NA
190 26.19 temperature 30 14400 > th dose independent rect. 8 1
236 26.24 temperature 30 14400 < th dose independent rect. 4 5
238 26.24 temperature 30 14400 < th dose independent rect. 1 8
247 26.25 radiation 1 90 < th dose independent rect. 3 23
255 26.26 temperature 30 14400 < th dose independent rect. 7 2
259 26.26 humidity 80 14400 > th dose independent rect. 19 12
264 26.27 wind 1 270 < th dose independent rect. 23 2
279 26.28 temperature 25 90 < th dose independent rect. 24 15
283 26.28 humidity 80 14400 < th dose dependent rect. 21 3
290 26.29 wind 9 14400 > th dose dependent rect. 13 2
297 26.30 humidity 80 14400 < th dose dependent rect. 20 9
310 26.31 radiation 1 90 < th dose independent rect. 6 23
315 26.31 atmosphere 995 10 > th dose dependent rect. 5 13
318 26.31 temperature 15 10 > th dose dependent rect. 9 17
327 26.32 temperature 15 10 > th dose dependent rect. 9 14
329 26.33 wind 9 14400 > th dose independent rect. 13 1
331 26.33 humidity 60 90 > th dose independent rect. 18 11
333 26.33 humidity 80 14400 < th dose independent rect. 19 12
337 26.33 humidity 70 30 > th dose dependent sin 2 NA
338 26.33 humidity 80 14400 < th dose dependent rect. 22 1
339 26.33 wind 1 270 < th dose dependent rect. 23 2
348 26.34 radiation 40 10 < th dose independent sin 0 NA
358 26.34 temperature 25 270 < th dose independent rect. 21 22
359 26.34 radiation 1 90 < th dose independent rect. 12 23
368 26.34 atmosphere 1000 10 > th dose dependent rect. 14 19
371 26.35 radiation 1 90 > th dose independent no NA NA
373 26.35 radiation 1 90 < th dose independent no NA NA
374 26.35 humidity 50 14400 > th dose independent rect. 13 1
378 26.35 temperature 25 270 < th dose independent rect. 21 13
380 26.35 radiation 1 90 > th dose independent rect. 4 15
428 26.35 radiation 1 90 < th dose independent rect. 9 23
435 26.35 temperature 25 270 > th dose dependent rect. 21 13
441 26.36 wind 9 14400 < th dose independent rect. 13 1
529 26.39 temperature 25 270 > th dose dependent rect. 23 9
541 26.40 temperature 25 720 > th dose dependent rect. 6 1
544 26.40 atmosphere 1015 30 < th dose dependent rect. 20 14
549 26.41 humidity 50 14400 < th dose independent rect. 13 1
551 26.41 temperature 25 90 < th dose independent rect. 24 11
574 26.42 radiation 1 90 < th dose dependent sin 13 NA
604 26.44 humidity 80 30 > th dose independent sin 2 NA
624 26.45 radiation 1 90 < th dose independent sin 13 NA
634 26.45 temperature 30 30 < th dose dependent sin 1 NA
636 26.45 temperature 15 30 > th dose dependent rect. 19 7
662 26.47 humidity 50 14400 > th dose independent rect. 10 4
671 26.47 humidity 80 14400 < th dose dependent rect. 4 1
682 26.48 temperature 25 720 > th dose independent rect. 6 1
726 26.49 wind 1 14400 < th dose dependent rect. 9 4
731 26.49 wind 9 10 < th dose dependent rect. 5 13
819 26.52 temperature 25 270 < th dose independent rect. 12 22
825 26.52 temperature 25 270 > th dose dependent rect. 9 1
841 26.52 radiation 40 90 < th dose dependent rect. 5 13
849 26.52 radiation 1 90 < th dose dependent rect. 24 23
851 26.53 humidity 50 14400 > th dose independent rect. 10 1
854 26.53 atmosphere 1005 10 > th dose independent rect. 23 10
856 26.53 wind 7 90 < th dose independent rect. 18 11
867 26.53 atmosphere 1015 90 < th dose independent rect. 5 13
882 26.53 humidity 80 14400 < th dose dependent rect. 1 4
909 26.54 atmosphere 995 90 > th dose independent rect. 18 11
917 26.54 humidity 80 14400 < th dose dependent rect. 1 1
920 26.54 temperature 25 90 < th dose dependent rect. 7 4
926 26.54 atmosphere 1005 10 < th dose dependent rect. 1 10
945 26.55 atmosphere 1015 4320 > th dose independent rect. 10 1
946 26.55 radiation 1 1440 < th dose independent rect. 12 1
952 26.55 radiation 1 1440 < th dose dependent rect. 12 1
957 26.55 radiation 1 270 < th dose dependent rect. 5 9
971 26.56 atmosphere 1015 4320 < th dose independent rect. 10 1
974 26.56 humidity 50 14400 < th dose independent rect. 9 5
992 26.56 temperature 25 270 < th dose independent rect. 18 16
999 26.56 humidity 90 90 < th dose independent rect. 10 22