Os01g0254800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0254800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.1 | 0.373 | 8.45 | -1.11 | 0.862 | 0.561 | -0.251 | 1.59 | -0.237 | 7.4 | 20 | 789 | -- | -- |
| 65.23 | 0.376 | 8.47 | -1.48 | 0.887 | 0.683 | -0.442 | -- | -0.322 | 7.36 | 19.09 | 752 | -- | -- |
| 63.23 | 0.37 | 8.44 | -1.08 | 0.865 | 0.553 | -- | 1.76 | -0.229 | 7.37 | 20 | 775 | -- | -- |
| 65.73 | 0.378 | 8.49 | -1.48 | 0.901 | 0.671 | -- | -- | -0.338 | 7.34 | 20.6 | 736 | -- | -- |
| 91.42 | 0.445 | 8.44 | -0.91 | -- | 0.311 | -- | 1.77 | -0.145 | -- | 22.9 | 2764 | -- | -- |
| 73.9 | 0.403 | 8.47 | -1.28 | 0.703 | -- | -0.703 | -- | -0.219 | 7.15 | -- | -- | -- | -- |
| 75.17 | 0.406 | 8.47 | -1.3 | 0.703 | -- | -- | -- | -0.218 | 7.01 | -- | -- | -- | -- |
| 90.41 | 0.443 | 8.47 | -1.35 | -- | 0.431 | -- | -- | -0.204 | -- | 28.1 | 5652 | -- | -- |
| 118.4 | 0.507 | 8.44 | -- | 0.788 | 0.221 | -- | -- | -0.1 | 7.06 | 21.6 | 587 | -- | -- |
| 101.17 | 0.47 | 8.48 | -1.28 | -- | -- | -- | -- | -0.205 | -- | -- | -- | -- | -- |
| 119.57 | 0.512 | 8.44 | -- | 0.689 | -- | -- | -- | -0.0735 | 7.13 | -- | -- | -- | -- |
| 122.72 | 0.516 | 8.4 | -- | -- | -0.753 | -- | -- | 0.163 | -- | 2.542 | 47520 | -- | -- |
| 144.65 | 0.561 | 8.45 | -- | -- | -- | -- | -- | -0.0627 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.71 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 7 | 61.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 61.35 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 9 | 61.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 13 | 61.43 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 9 |
| 16 | 61.47 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 20 | 61.56 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 24 | 61.60 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 6 |
| 25 | 61.61 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 26 | 61.61 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 27 | 61.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 8 |
| 35 | 61.66 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 24 | 8 |
| 37 | 61.67 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 12 |
| 49 | 61.79 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 50 | 61.79 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 53 | 61.80 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 60 | 61.82 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 62 | 61.82 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 74 | 61.87 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 79 | 61.91 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 94 | 61.95 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 102 | 61.99 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 149 | 62.13 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 163 | 62.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 9 |
| 167 | 62.21 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 183 | 62.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 188 | 62.27 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 220 | 62.36 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 225 | 62.36 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 281 | 62.47 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 286 | 62.48 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 297 | 62.51 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 309 | 62.55 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 9 |
| 313 | 62.57 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 329 | 62.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 332 | 62.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 336 | 62.62 | temperature | 30.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 338 | 62.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 339 | 62.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 346 | 62.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 353 | 62.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 357 | 62.69 | temperature | 30.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 370 | 62.71 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 376 | 62.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 378 | 62.74 | temperature | 25.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 385 | 62.75 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 388 | 62.75 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 402 | 62.79 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 404 | 62.80 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 420 | 62.81 | temperature | 25.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 433 | 62.84 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 437 | 62.84 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 10 | 22 |
| 459 | 62.87 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 469 | 62.88 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 515 | 62.93 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 517 | 62.93 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 530 | 62.98 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 549 | 63.00 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 580 | 63.02 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 616 | 63.06 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 619 | 63.06 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 653 | 63.08 | temperature | 20.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 658 | 63.09 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 659 | 63.09 | temperature | 20.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 678 | 63.11 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 798 | 63.22 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 807 | 63.22 | temperature | 20.0 | 720 | > th | dose dependent | no | NA | NA |
| 808 | 63.22 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 815 | 63.22 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 862 | 63.24 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 869 | 63.25 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 874 | 63.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 901 | 63.27 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 920 | 63.27 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 935 | 63.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 940 | 63.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 996 | 63.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 6 |