Os01g0253300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Importin alpha-1a subunit.
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Os01g0253300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Importin alpha-1a subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.9 | 0.304 | 12.8 | 1.32 | 0.244 | 0.498 | 0.301 | 0.935 | 0.712 | 23.7 | 20.9 | 1593 | -- | -- |
| 43.75 | 0.308 | 12.8 | 1.13 | 0.243 | 0.411 | 0.363 | -- | 0.676 | 23.2 | 21 | 1776 | -- | -- |
| 42.29 | 0.303 | 12.8 | 1.31 | 0.242 | 0.498 | -- | 0.933 | 0.71 | 23.9 | 20.9 | 1593 | -- | -- |
| 43.96 | 0.309 | 12.8 | 1.06 | 0.237 | 0.403 | -- | -- | 0.642 | 23.5 | 21.4 | 2889 | -- | -- |
| 45.5 | 0.314 | 12.8 | 1.3 | -- | 0.49 | -- | 0.855 | 0.696 | -- | 21.4 | 2180 | -- | -- |
| 47.71 | 0.324 | 12.8 | 1.29 | 0.245 | -- | 0.302 | -- | 0.769 | 23.6 | -- | -- | -- | -- |
| 48.09 | 0.325 | 12.8 | 1.28 | 0.244 | -- | -- | -- | 0.767 | 23.9 | -- | -- | -- | -- |
| 47.06 | 0.32 | 12.8 | 1.08 | -- | 0.418 | -- | -- | 0.646 | -- | 21.3 | 2409 | -- | -- |
| 49.56 | 0.328 | 12.9 | -- | 0.23 | 1.02 | -- | -- | 0.379 | 23.8 | 18.51 | 47520 | -- | -- |
| 51.83 | 0.336 | 12.8 | 1.29 | -- | -- | -- | -- | 0.771 | -- | -- | -- | -- | -- |
| 91.13 | 0.447 | 12.9 | -- | 0.261 | -- | -- | -- | 0.625 | 0.158 | -- | -- | -- | -- |
| 52.88 | 0.339 | 12.9 | -- | -- | 1.03 | -- | -- | 0.378 | -- | 18.54 | 47520 | -- | -- |
| 95.41 | 0.456 | 12.8 | -- | -- | -- | -- | -- | 0.628 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 2 | 40.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 3 | 40.54 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 4 | 40.58 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 7 |
| 16 | 40.96 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 8 |
| 26 | 41.12 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 28 | 41.19 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 34 | 41.22 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 35 | 41.22 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 39 | 41.25 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 44 | 41.30 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 9 |
| 54 | 41.40 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 19 |
| 63 | 41.44 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 69 | 41.47 | wind | 1 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 80 | 41.53 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 102 | 41.62 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 108 | 41.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 114 | 41.66 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 119 | 41.69 | temperature | 20 | 270 | > th | dose independent | rect. | 7 | 21 |
| 126 | 41.71 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 135 | 41.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 148 | 41.78 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 161 | 41.81 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 14 |
| 221 | 41.93 | wind | 1 | 14400 | < th | dose independent | sin | 9 | NA |
| 237 | 41.97 | wind | 1 | 14400 | > th | dose independent | sin | 9 | NA |
| 264 | 42.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 276 | 42.03 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 308 | 42.07 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 321 | 42.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 325 | 42.10 | wind | 1 | 14400 | < th | dose dependent | sin | 9 | NA |
| 332 | 42.11 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 341 | 42.12 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 13 |
| 370 | 42.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 5 |
| 379 | 42.15 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 392 | 42.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 402 | 42.17 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 451 | 42.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 490 | 42.24 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 636 | 42.35 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 645 | 42.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 689 | 42.39 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 742 | 42.42 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 782 | 42.46 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 795 | 42.46 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 808 | 42.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 870 | 42.51 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 917 | 42.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 953 | 42.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 21 |
| 954 | 42.56 | humidity | 70 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 996 | 42.58 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 8 |