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Os01g0252600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0177) R2 : 0.68
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.29 (0.0429) R2dC : 0.641 R2C : 0.626
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.287 (0.0371) R2dN8 : 0.0543 R2N8 : 0.0387
σ : 0.333
deviance : 50.68
__
_____
C
peak time of C : 22.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.56 0.288 13.1 -0.403 0.838 0.468 -1.31 0.238 -0.328 20.9 0.2051 33 -- --
37.7 0.286 13.1 -0.393 0.827 0.482 -1.07 -- -0.333 20.8 0.1976 34 -- --
39.73 0.294 13.1 -0.33 0.801 0.54 -- -0.521 -0.312 20.6 0.07 43 -- --
41.33 0.299 13.1 -0.346 0.818 0.509 -- -- -0.317 20.8 1.848e-06 43 -- --
60.55 0.362 13.1 -0.237 -- 0.892 -- -0.598 -0.348 -- 0.0003739 26 -- --
43.11 0.308 13.1 -0.441 1.29 -- -0.91 -- -0.334 22 -- -- -- --
46.34 0.319 13.1 -0.406 1.29 -- -- -- -0.333 22.1 -- -- -- --
62.4 0.368 13.1 -0.302 -- 0.901 -- -- -0.351 -- 0.09219 23 -- --
44.46 0.311 13.1 -- 0.827 0.509 -- -- -0.278 20.7 0.00988 43 -- --
147.64 0.568 13.1 -0.389 -- -- -- -- -0.331 -- -- -- -- --
50.68 0.333 13.1 -- 1.29 -- -- -- -0.287 22.1 -- -- -- --
64.35 0.374 13.1 -- -- 0.881 -- -- -0.291 -- 0.09732 12 -- --
151.63 0.575 13.1 -- -- -- -- -- -0.288 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.60 atmosphere 1000.0 90 > th dose independent rect. 5 2
2 29.88 temperature 10.0 10 > th dose dependent rect. 8 21
4 30.15 humidity 50.0 90 > th dose dependent rect. 5 2
5 30.21 wind 7.0 90 < th dose independent rect. 5 2
7 30.21 temperature 10.0 90 > th dose independent rect. 5 2
9 30.21 temperature 30.0 90 < th dose independent rect. 5 2
10 30.21 humidity 50.0 90 > th dose independent rect. 5 2
13 30.21 atmosphere 1015.0 90 < th dose independent rect. 5 2
14 30.21 radiation 40.0 90 < th dose independent rect. 5 2
15 30.21 precipitation 0.1 90 < th dose independent rect. 5 2
16 30.21 temperature 10.0 90 > th dose independent rect. 7 22
17 30.21 atmosphere 995.0 90 > th dose dependent rect. 5 2
18 30.21 precipitation 0.1 90 < th dose dependent rect. 5 2
22 30.26 wind 9.0 90 < th dose independent rect. 7 22
24 30.31 radiation 40.0 90 < th dose dependent rect. 5 2
25 30.35 wind 9.0 90 < th dose dependent rect. 5 2
27 30.41 precipitation 0.1 90 < th dose independent rect. 7 22
29 30.41 precipitation 0.1 90 < th dose dependent rect. 7 22
35 30.55 temperature 10.0 90 > th dose dependent rect. 5 2
37 30.65 humidity 80.0 90 > th dose independent rect. 5 4
39 30.69 humidity 70.0 90 > th dose dependent rect. 5 4
42 30.72 atmosphere 1015.0 90 < th dose independent rect. 7 22
45 30.72 radiation 20.0 90 < th dose dependent rect. 5 4
49 30.87 humidity 70.0 90 > th dose dependent rect. 5 6
50 30.89 radiation 10.0 90 < th dose independent rect. 5 4
59 31.00 wind 1.0 90 > th dose independent rect. 5 2
79 31.41 atmosphere 995.0 90 > th dose independent rect. 7 22
118 31.89 radiation 20.0 10 < th dose independent rect. 5 3
131 31.91 radiation 1.0 90 > th dose independent rect. 4 3
152 32.03 atmosphere 1000.0 270 > th dose independent rect. 3 4
158 32.06 temperature 10.0 10 > th dose dependent rect. 5 3
173 32.19 radiation 40.0 10 < th dose dependent rect. 5 3
174 32.20 radiation 1.0 10 < th dose dependent sin 9 NA
198 32.36 humidity 50.0 90 > th dose independent rect. 7 22
208 32.45 humidity 50.0 10 > th dose independent rect. 8 21
232 32.62 temperature 10.0 30 > th dose dependent rect. 23 6
240 32.69 temperature 30.0 90 < th dose dependent rect. 5 2
244 32.73 atmosphere 995.0 10 > th dose dependent rect. 5 17
251 32.80 atmosphere 995.0 270 > th dose dependent rect. 3 4
260 32.85 temperature 30.0 90 < th dose dependent rect. 5 6
274 32.93 wind 1.0 90 > th dose independent rect. 7 22
285 32.97 atmosphere 1015.0 90 < th dose independent rect. 21 8
291 33.00 radiation 30.0 10 < th dose dependent rect. 5 5
294 33.01 temperature 30.0 90 < th dose dependent rect. 5 4
296 33.02 radiation 1.0 10 < th dose independent sin 9 NA
301 33.03 atmosphere 1015.0 90 < th dose dependent rect. 5 2
303 33.04 temperature 15.0 90 > th dose independent rect. 21 8
306 33.05 radiation 1.0 10 > th dose independent rect. 5 3
324 33.09 humidity 80.0 10 > th dose dependent rect. 6 1
331 33.13 wind 7.0 90 < th dose independent rect. 21 8
343 33.18 radiation 1.0 90 < th dose dependent rect. 21 8
346 33.19 temperature 30.0 90 < th dose independent rect. 21 8
347 33.19 humidity 50.0 90 > th dose independent rect. 21 8
350 33.19 atmosphere 995.0 90 > th dose independent rect. 21 8
351 33.19 radiation 1.0 90 < th dose independent rect. 21 8
356 33.19 temperature 10.0 90 > th dose independent rect. 5 16
357 33.19 atmosphere 1015.0 90 < th dose independent rect. 5 16
363 33.20 atmosphere 1000.0 10 > th dose independent rect. 7 23
368 33.22 atmosphere 1015.0 10 < th dose independent rect. 22 7
374 33.22 humidity 50.0 270 > th dose dependent rect. 3 4
376 33.23 wind 7.0 270 < th dose independent rect. 3 4
387 33.26 temperature 10.0 270 > th dose independent rect. 3 4
389 33.26 temperature 30.0 270 < th dose independent rect. 3 4
390 33.26 humidity 50.0 270 > th dose independent rect. 3 4
393 33.26 atmosphere 1015.0 270 < th dose independent rect. 3 4
394 33.26 radiation 30.0 270 < th dose independent rect. 3 4
406 33.29 precipitation 0.1 90 < th dose independent rect. 21 8
408 33.29 precipitation 0.1 90 < th dose dependent rect. 21 8
409 33.30 wind 1.0 270 > th dose independent rect. 3 4
461 33.35 precipitation 0.1 270 < th dose independent rect. 3 4
464 33.35 precipitation 0.1 270 < th dose dependent rect. 3 4
471 33.37 radiation 1.0 270 < th dose dependent rect. 4 6
482 33.41 temperature 15.0 10 > th dose independent rect. 22 7
488 33.43 wind 9.0 90 < th dose dependent rect. 7 22
492 33.44 precipitation 0.1 90 < th dose independent rect. 5 16
498 33.44 precipitation 0.1 90 < th dose dependent rect. 5 16
499 33.44 atmosphere 1015.0 10 < th dose dependent rect. 8 21
511 33.48 atmosphere 1010.0 10 < th dose independent rect. 10 19
513 33.48 radiation 1.0 30 > th dose dependent rect. 5 2
542 33.52 wind 9.0 90 < th dose dependent rect. 21 8
554 33.55 atmosphere 1000.0 30 > th dose independent rect. 5 17
558 33.56 temperature 30.0 10 < th dose dependent rect. 6 1
567 33.58 wind 9.0 1440 < th dose independent rect. 6 3
568 33.58 temperature 10.0 1440 > th dose independent rect. 6 3
571 33.58 humidity 50.0 1440 > th dose independent rect. 6 3
573 33.58 atmosphere 995.0 1440 > th dose independent rect. 6 3
574 33.58 atmosphere 1015.0 1440 < th dose independent rect. 6 3
577 33.58 temperature 10.0 1440 > th dose independent rect. 9 21
587 33.60 wind 9.0 10 < th dose dependent rect. 22 7
652 33.65 wind 9.0 90 < th dose independent rect. 5 16
655 33.66 radiation 1.0 10 > th dose independent sin 9 NA
727 33.75 atmosphere 1015.0 10 < th dose dependent rect. 6 1
736 33.76 temperature 30.0 10 < th dose independent rect. 22 7
738 33.76 humidity 50.0 10 > th dose independent rect. 22 7
744 33.76 atmosphere 995.0 10 > th dose independent rect. 22 7
746 33.76 radiation 1.0 10 < th dose independent rect. 22 7
756 33.76 temperature 10.0 10 > th dose independent rect. 5 17
760 33.76 atmosphere 1015.0 10 < th dose independent rect. 5 17
762 33.76 radiation 10.0 10 < th dose dependent rect. 22 7
903 33.91 wind 1.0 10 > th dose independent rect. 6 1
913 33.92 atmosphere 1000.0 270 > th dose independent rect. 16 15