Os01g0247700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C4-dicarboxylate transporter/malic acid transport protein family protein.
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Os01g0247700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C4-dicarboxylate transporter/malic acid transport protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.43 | 0.617 | 3.04 | 0.975 | 0.449 | -0.275 | -0.915 | -4.73 | 0.018 | 3.22 | 24.72 | 4244 | -- | -- |
| 188.4 | 0.639 | 3.19 | -0.235 | 0.471 | -0.393 | -0.452 | -- | -0.191 | 3.59 | 31.42 | 4026 | -- | -- |
| 174.58 | 0.615 | 3.04 | 0.95 | 0.457 | -0.28 | -- | -4.59 | 0.00718 | 3.85 | 24.71 | 4330 | -- | -- |
| 187.76 | 0.638 | 3.16 | -0.261 | 0.472 | -0.449 | -- | -- | -0.142 | 4.07 | 30.4 | 2850 | -- | -- |
| 186.11 | 0.635 | 3.05 | 0.918 | -- | -0.376 | -- | -4.44 | -0.00694 | -- | 24.6 | 4197 | -- | -- |
| 195.21 | 0.655 | 3.19 | -0.132 | 0.489 | -- | -0.679 | -- | -0.244 | 3.38 | -- | -- | -- | -- |
| 196.43 | 0.656 | 3.18 | -0.12 | 0.496 | -- | -- | -- | -0.24 | 3.88 | -- | -- | -- | -- |
| 198.96 | 0.657 | 3.16 | -0.236 | -- | -0.498 | -- | -- | -0.128 | -- | 30.4 | 2806 | -- | -- |
| 189.25 | 0.641 | 3.16 | -- | 0.457 | -0.407 | -- | -- | -0.132 | 4.08 | 30.34 | 2821 | -- | -- |
| 209.95 | 0.677 | 3.18 | -0.0992 | -- | -- | -- | -- | -0.227 | -- | -- | -- | -- | -- |
| 196.81 | 0.656 | 3.18 | -- | 0.494 | -- | -- | -- | -0.227 | 3.88 | -- | -- | -- | -- |
| 200.43 | 0.659 | 3.16 | -- | -- | -0.459 | -- | -- | -0.11 | -- | 30.4 | 2806 | -- | -- |
| 210.21 | 0.677 | 3.18 | -- | -- | -- | -- | -- | -0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 15 |
| 2 | 168.41 | temperature | 20 | 720 | > th | dose dependent | sin | 12 | NA |
| 10 | 168.61 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 14 | 168.73 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 16 | 168.76 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 35 | 169.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 43 | 169.33 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 56 | 169.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 60 | 169.49 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 65 | 169.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 72 | 169.59 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 91 | 169.74 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 122 | 169.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 154 | 170.20 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 180 | 170.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 183 | 170.36 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 184 | 170.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 195 | 170.42 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 4 |
| 216 | 170.52 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 221 | 170.54 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 15 |
| 231 | 170.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 13 |
| 240 | 170.62 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 11 |
| 266 | 170.71 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 389 | 171.07 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 533 | 171.40 | temperature | 15 | 4320 | > th | dose dependent | sin | 13 | NA |
| 561 | 171.47 | temperature | 30 | 4320 | < th | dose dependent | sin | 13 | NA |
| 623 | 171.61 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |