Os01g0245600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0245600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.75 | 0.583 | 8.28 | 1.25 | 1.35 | -1.66 | 0.919 | -0.894 | -0.365 | 5.32 | 21.37 | 1324 | -- | -- |
| 153.94 | 0.578 | 8.24 | 1.38 | 1.34 | -1.5 | 0.886 | -- | -0.295 | 5.29 | 21.84 | 1314 | -- | -- |
| 155.76 | 0.581 | 8.28 | 1.27 | 1.35 | -1.67 | -- | -0.83 | -0.362 | 5.21 | 21.39 | 1323 | -- | -- |
| 155.59 | 0.581 | 8.24 | 1.36 | 1.35 | -1.46 | -- | -- | -0.276 | 5.06 | 22 | 1214 | -- | -- |
| 241.42 | 0.724 | 8.28 | 1.2 | -- | -1.23 | -- | -0.214 | -0.339 | -- | 22.17 | 525 | -- | -- |
| 227.85 | 0.708 | 8.35 | 0.814 | 1.29 | -- | 1.13 | -- | -0.757 | 5.55 | -- | -- | -- | -- |
| 230.92 | 0.712 | 8.35 | 0.817 | 1.3 | -- | -- | -- | -0.763 | 5.43 | -- | -- | -- | -- |
| 241.57 | 0.724 | 8.28 | 1.26 | -- | -1.23 | -- | -- | -0.329 | -- | 22.15 | 494 | -- | -- |
| 196.8 | 0.653 | 8.3 | -- | 1.37 | -1.08 | -- | -- | -0.523 | 5 | 22.38 | 1143 | -- | -- |
| 318.67 | 0.834 | 8.37 | 0.861 | -- | -- | -- | -- | -0.731 | -- | -- | -- | -- | -- |
| 248.52 | 0.737 | 8.37 | -- | 1.31 | -- | -- | -- | -0.854 | 5.41 | -- | -- | -- | -- |
| 280.61 | 0.78 | 8.31 | -- | -- | -1.03 | -- | -- | -0.506 | -- | 22.4 | 486 | -- | -- |
| 338.21 | 0.858 | 8.39 | -- | -- | -- | -- | -- | -0.826 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 157.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 3 | 157.98 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 4 | 158.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 8 | 158.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 10 | 158.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 18 | 159.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 20 | 159.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 54 | 159.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 75 | 159.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 109 | 160.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 141 | 160.56 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 148 | 160.63 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 179 | 160.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 250 | 161.47 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 451 | 163.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 453 | 163.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 537 | 163.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 634 | 164.29 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 642 | 164.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 662 | 164.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 706 | 164.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 19 |
| 777 | 165.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 797 | 165.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 834 | 165.54 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 836 | 165.55 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 939 | 166.26 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |