Os01g0240900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C1A, papain family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0240900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase C1A, papain family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.16 | 0.587 | 4.59 | 1.09 | 0.471 | 2.09 | 0.0886 | 0.589 | -0.397 | 9.85 | 24.48 | 852 | -- | -- |
| 156.53 | 0.583 | 4.58 | 1.19 | 0.477 | 2.02 | 0.234 | -- | -0.372 | 9.66 | 24.7 | 888 | -- | -- |
| 156.17 | 0.582 | 4.59 | 1.09 | 0.473 | 2.1 | -- | 0.657 | -0.399 | 9.87 | 24.4 | 854 | -- | -- |
| 156.72 | 0.583 | 4.58 | 1.19 | 0.472 | 2.01 | -- | -- | -0.372 | 9.88 | 24.61 | 862 | -- | -- |
| 167.2 | 0.602 | 4.59 | 1.14 | -- | 2.26 | -- | 0.556 | -0.326 | -- | 25.45 | 809 | -- | -- |
| 215.33 | 0.688 | 4.66 | 0.614 | 0.727 | -- | 0.0542 | -- | -0.782 | 10.3 | -- | -- | -- | -- |
| 215.34 | 0.687 | 4.66 | 0.617 | 0.727 | -- | -- | -- | -0.782 | 10.3 | -- | -- | -- | -- |
| 167.57 | 0.603 | 4.57 | 1.24 | -- | 2.21 | -- | -- | -0.299 | -- | 25.72 | 815 | -- | -- |
| 189.18 | 0.641 | 4.63 | -- | 0.53 | 1.47 | -- | -- | -0.602 | 10.1 | 24.51 | 793 | -- | -- |
| 247.54 | 0.735 | 4.68 | 0.605 | -- | -- | -- | -- | -0.784 | -- | -- | -- | -- | -- |
| 225.36 | 0.702 | 4.68 | -- | 0.723 | -- | -- | -- | -0.851 | 10.3 | -- | -- | -- | -- |
| 203.35 | 0.664 | 4.62 | -- | -- | 1.7 | -- | -- | -0.532 | -- | 25.88 | 778 | -- | -- |
| 257.2 | 0.749 | 4.7 | -- | -- | -- | -- | -- | -0.851 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 153.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 4 | 153.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 5 | 153.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 15 | 154.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 26 | 154.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 35 | 154.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 48 | 154.89 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 74 | 155.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 95 | 155.31 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 109 | 155.40 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 116 | 155.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 144 | 155.72 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 171 | 155.93 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 350 | 157.21 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 384 | 157.53 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 414 | 157.74 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 500 | 158.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |