Os01g0237000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
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Os01g0237000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF588 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.47 | 0.324 | 2.82 | 0.0329 | 0.101 | 1.14 | -0.0676 | 2.3 | -0.0125 | 13.9 | 9.001 | 7 | -- | -- |
| 48.35 | 0.324 | 2.8 | 0.0292 | 0.0977 | 0.793 | 0.0562 | -- | -0.00876 | 13.5 | 9.2 | 6 | -- | -- |
| 47.49 | 0.321 | 2.82 | 0.0312 | 0.1 | 1.14 | -- | 2.27 | -0.0123 | 14 | 9.006 | 6 | -- | -- |
| 48.37 | 0.324 | 2.8 | 0.0312 | 0.0992 | 0.787 | -- | -- | -0.00558 | 13.6 | 9.2 | 6 | -- | -- |
| 40.47 | 0.296 | 2.83 | -0.0122 | -- | 1.62 | -- | 2.94 | -0.0263 | -- | 9.292 | 2 | -- | -- |
| 50.61 | 0.334 | 2.81 | -0.0126 | 0.129 | -- | -0.0196 | -- | -0.0267 | 14 | -- | -- | -- | -- |
| 50.62 | 0.333 | 2.81 | -0.0132 | 0.129 | -- | -- | -- | -0.0268 | 14 | -- | -- | -- | -- |
| 46.36 | 0.317 | 2.81 | 0.0136 | -- | 1.33 | -- | -- | -0.015 | -- | 9.25 | 2 | -- | -- |
| 46.62 | 0.318 | 2.8 | -- | 0.0202 | 0.95 | -- | -- | 0.0165 | 13.4 | 9.256 | 3 | -- | -- |
| 51.62 | 0.336 | 2.81 | -0.0186 | -- | -- | -- | -- | -0.0298 | -- | -- | -- | -- | -- |
| 50.62 | 0.333 | 2.81 | -- | 0.129 | -- | -- | -- | -0.0253 | 14 | -- | -- | -- | -- |
| 46.37 | 0.317 | 2.81 | -- | -- | 1.33 | -- | -- | -0.0165 | -- | 9.242 | 2 | -- | -- |
| 51.63 | 0.335 | 2.81 | -- | -- | -- | -- | -- | -0.0277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.12 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 5 | 33.12 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 33.13 | humidity | 60.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 11 | 33.13 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 19 | 33.13 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 21 | 33.13 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 10 |
| 203 | 35.13 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 220 | 35.13 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 377 | 38.55 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 378 | 38.65 | wind | 1.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 382 | 38.78 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 397 | 39.46 | wind | 1.0 | 270 | < th | dose dependent | rect. | 12 | 4 |
| 553 | 43.20 | wind | 9.0 | 10 | > th | dose independent | sin | 10 | NA |
| 561 | 43.49 | wind | 9.0 | 10 | < th | dose independent | sin | 10 | NA |
| 566 | 43.70 | wind | 1.0 | 270 | < th | dose independent | sin | 22 | NA |
| 607 | 44.32 | wind | 1.0 | 270 | > th | dose independent | sin | 22 | NA |
| 662 | 45.09 | wind | 1.0 | 270 | < th | dose dependent | sin | 21 | NA |
| 698 | 45.63 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 805 | 46.63 | humidity | 70.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 806 | 46.63 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 809 | 46.63 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 858 | 46.88 | temperature | 20.0 | 10 | < th | dose independent | rect. | 12 | 4 |
| 859 | 46.89 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 3 |
| 865 | 46.91 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 8 | 1 |
| 867 | 46.91 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 872 | 46.94 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 12 |
| 877 | 46.96 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 1 |
| 889 | 47.00 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 898 | 47.02 | temperature | 20.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 935 | 47.07 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 963 | 47.14 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 964 | 47.15 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 965 | 47.16 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 4 | 5 |
| 973 | 47.17 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 4 |
| 977 | 47.18 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 4 | 1 |