Os01g0235300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : SOUL heme-binding protein family protein.
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Os01g0235300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : SOUL heme-binding protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.33 | 0.267 | 10.7 | 0.0437 | 0.894 | -0.981 | 0.0686 | 0.209 | 0.321 | 0.785 | 23.1 | 302 | -- | -- |
| 32.3 | 0.265 | 10.7 | 0.0646 | 0.881 | -1.04 | 0.0978 | -- | 0.326 | 0.817 | 22.87 | 335 | -- | -- |
| 32.31 | 0.265 | 10.7 | 0.0367 | 0.882 | -0.998 | -- | 0.211 | 0.323 | 0.804 | 22.98 | 326 | -- | -- |
| 32.34 | 0.265 | 10.7 | 0.0601 | 0.883 | -1.04 | -- | -- | 0.326 | 0.811 | 22.86 | 332 | -- | -- |
| 66.85 | 0.381 | 10.8 | 0.0254 | -- | -1.09 | -- | 0.305 | 0.212 | -- | 26.59 | 885 | -- | -- |
| 44.33 | 0.312 | 10.7 | 0.302 | 0.839 | -- | 0.0957 | -- | 0.469 | 0.502 | -- | -- | -- | -- |
| 44.37 | 0.312 | 10.7 | 0.298 | 0.839 | -- | -- | -- | 0.469 | 0.498 | -- | -- | -- | -- |
| 66.84 | 0.381 | 10.8 | -0.0161 | -- | -1.16 | -- | -- | 0.201 | -- | 26.45 | 884 | -- | -- |
| 32.43 | 0.265 | 10.7 | -- | 0.886 | -1.08 | -- | -- | 0.317 | 0.819 | 22.83 | 329 | -- | -- |
| 88.53 | 0.44 | 10.7 | 0.327 | -- | -- | -- | -- | 0.483 | -- | -- | -- | -- | -- |
| 46.71 | 0.32 | 10.7 | -- | 0.843 | -- | -- | -- | 0.435 | 0.516 | -- | -- | -- | -- |
| 66.77 | 0.381 | 10.8 | -- | -- | -1.15 | -- | -- | 0.226 | -- | 26.56 | 897 | -- | -- |
| 91.35 | 0.446 | 10.7 | -- | -- | -- | -- | -- | 0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.89 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 17 | 17 |
| 12 | 33.06 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 20 | 33.22 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 41 | 33.36 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 47 | 33.41 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 48 | 33.41 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 50 | 33.43 | temperature | 25.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 52 | 33.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 57 | 33.48 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 65 | 33.51 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 74 | 33.60 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 81 | 33.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 88 | 33.67 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 18 |
| 93 | 33.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 109 | 33.78 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 114 | 33.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 115 | 33.79 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 129 | 33.84 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 140 | 33.87 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 158 | 33.91 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 174 | 33.95 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 176 | 33.95 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 195 | 34.02 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 197 | 34.02 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 212 | 34.04 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 215 | 34.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 216 | 34.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 220 | 34.06 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 238 | 34.12 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 21 |
| 251 | 34.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 263 | 34.18 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 264 | 34.18 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 283 | 34.22 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 15 |
| 293 | 34.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 295 | 34.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 306 | 34.26 | temperature | 25.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 314 | 34.27 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 318 | 34.28 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 326 | 34.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 23 |
| 341 | 34.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 342 | 34.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 347 | 34.32 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 368 | 34.35 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 388 | 34.38 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 396 | 34.39 | temperature | 20.0 | 270 | < th | dose independent | rect. | 14 | 21 |
| 420 | 34.42 | temperature | 20.0 | 270 | < th | dose independent | rect. | 11 | 23 |
| 453 | 34.46 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 480 | 34.50 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |
| 522 | 34.55 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 570 | 34.62 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 596 | 34.65 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 631 | 34.71 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 638 | 34.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 670 | 34.77 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 703 | 34.81 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 722 | 34.83 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 739 | 34.85 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 7 | 5 |
| 754 | 34.87 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 764 | 34.88 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 784 | 34.91 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 816 | 34.93 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 23 |
| 861 | 34.96 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 888 | 34.98 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 916 | 34.99 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 950 | 35.01 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 989 | 35.03 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 4 |