Os01g0232800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0232800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.71 | 0.209 | 11.6 | 0.0583 | 0.21 | 0.838 | 0.429 | -1.31 | 0.0424 | 22.8 | 6.525 | 943 | -- | -- |
| 21.14 | 0.214 | 11.6 | 0.266 | 0.283 | 0.696 | 0.214 | -- | 0.0964 | 22.3 | 7.635 | 2503 | -- | -- |
| 20.29 | 0.21 | 11.6 | 0.0799 | 0.269 | 0.794 | -- | -1.02 | 0.0493 | 22.3 | 5.795 | 1154 | -- | -- |
| 21.39 | 0.215 | 11.6 | 0.258 | 0.278 | 0.699 | -- | -- | 0.0993 | 22.6 | 7.559 | 2418 | -- | -- |
| 22.53 | 0.221 | 11.6 | 0.0878 | -- | 1 | -- | -0.931 | 0.0401 | -- | 7.568 | 875 | -- | -- |
| 30.59 | 0.259 | 11.5 | 0.535 | 0.357 | -- | 0.259 | -- | 0.243 | 22.9 | -- | -- | -- | -- |
| 30.87 | 0.26 | 11.5 | 0.524 | 0.356 | -- | -- | -- | 0.242 | 23 | -- | -- | -- | -- |
| 23.22 | 0.224 | 11.6 | 0.265 | -- | 0.987 | -- | -- | 0.0882 | -- | 0.4687 | 861 | -- | -- |
| 21.9 | 0.218 | 11.6 | -- | 0.32 | 0.835 | -- | -- | -0.00647 | 22.8 | 6.118 | 8123 | -- | -- |
| 38.74 | 0.291 | 11.5 | 0.532 | -- | -- | -- | -- | 0.244 | -- | -- | -- | -- | -- |
| 38.1 | 0.289 | 11.5 | -- | 0.36 | -- | -- | -- | 0.183 | 23.1 | -- | -- | -- | -- |
| 24.86 | 0.232 | 11.6 | -- | -- | 1.09 | -- | -- | 0.0446 | -- | -3.173 | 882 | -- | -- |
| 46.2 | 0.317 | 11.5 | -- | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.09 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 15 | 19.57 | wind | 7.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 18 | 19.60 | wind | 7.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 26 | 19.64 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 28 | 19.67 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 30 | 19.69 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 33 | 19.69 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 36 | 19.70 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 38 | 19.70 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 39 | 19.71 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 60 | 19.79 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 69 | 19.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 17 |
| 73 | 19.85 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 80 | 19.86 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 87 | 19.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 90 | 19.89 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 15 |
| 94 | 19.89 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 101 | 19.90 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 104 | 19.91 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 109 | 19.91 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 115 | 19.92 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 116 | 19.92 | temperature | 10.0 | 720 | > th | dose dependent | no | NA | NA |
| 124 | 19.92 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 141 | 19.94 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 159 | 19.95 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 167 | 19.96 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 181 | 19.97 | wind | 7.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 194 | 19.98 | wind | 7.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 217 | 19.99 | wind | 7.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 220 | 19.99 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 234 | 19.99 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 18 |
| 238 | 20.00 | wind | 7.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 240 | 20.00 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 251 | 20.00 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 306 | 20.03 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 364 | 20.06 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 20 |
| 366 | 20.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 370 | 20.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 383 | 20.08 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 406 | 20.09 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 430 | 20.09 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 16 |
| 462 | 20.11 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 464 | 20.11 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 465 | 20.11 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 480 | 20.11 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 23 | 16 |
| 496 | 20.12 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 515 | 20.13 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 553 | 20.13 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 599 | 20.15 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 608 | 20.16 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 611 | 20.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 15 |
| 614 | 20.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 18 |
| 647 | 20.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 648 | 20.17 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 22 |
| 681 | 20.18 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 15 |
| 706 | 20.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 721 | 20.19 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 8 | 15 |
| 744 | 20.20 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 767 | 20.21 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 772 | 20.21 | wind | 5.0 | 43200 | > th | dose dependent | sin | 4 | NA |
| 797 | 20.22 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 803 | 20.22 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 822 | 20.22 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 22 |
| 859 | 20.23 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 17 |
| 872 | 20.24 | radiation | 1.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 918 | 20.25 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 18 |
| 962 | 20.26 | radiation | 1.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 963 | 20.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 972 | 20.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |