Os01g0226500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0226500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.43 | 0.334 | 8.03 | -0.743 | 0.658 | 0.187 | 0.447 | -2.28 | 0.0109 | 2.2 | 23.1 | 1072 | -- | -- |
| 57.44 | 0.353 | 8.11 | -1.52 | 0.679 | 0.618 | 0.632 | -- | -0.223 | 2.16 | 18.08 | 893 | -- | -- |
| 51.12 | 0.333 | 8.03 | -0.72 | 0.658 | 0.188 | -- | -2.38 | 0.0209 | 2.26 | 23.18 | 1050 | -- | -- |
| 59.32 | 0.359 | 8.12 | -1.44 | 0.72 | 0.784 | -- | -- | -0.202 | 2.17 | 18 | 918 | -- | -- |
| 76.18 | 0.407 | 8.03 | -0.714 | -- | 0.0724 | -- | -2.43 | -0.0107 | -- | 23.1 | 1040 | -- | -- |
| 63.29 | 0.373 | 8.13 | -1.62 | 0.646 | -- | 0.855 | -- | -0.274 | 2.14 | -- | -- | -- | -- |
| 65.95 | 0.38 | 8.13 | -1.65 | 0.653 | -- | -- | -- | -0.279 | 2.38 | -- | -- | -- | -- |
| 86.2 | 0.434 | 8.1 | -1.52 | -- | 0.257 | -- | -- | -0.166 | -- | 23.1 | 1040 | -- | -- |
| 75.37 | 0.404 | 8.04 | -- | 0.578 | 1.37 | -- | -- | 0.158 | 2.56 | 18.15 | 41150 | -- | -- |
| 91.13 | 0.446 | 8.13 | -1.62 | -- | -- | -- | -- | -0.263 | -- | -- | -- | -- | -- |
| 137.34 | 0.548 | 8.09 | -- | 0.621 | -- | -- | -- | -0.096 | 2.34 | -- | -- | -- | -- |
| 97.12 | 0.459 | 8.01 | -- | -- | 1.44 | -- | -- | 0.202 | -- | 16.7 | 33601 | -- | -- |
| 160.2 | 0.591 | 8.09 | -- | -- | -- | -- | -- | -0.0837 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.42 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 17 |
| 3 | 50.63 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 7 | 50.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 16 |
| 12 | 51.00 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 13 | 51.01 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 21 | 51.13 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 24 | 51.17 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 28 | 51.21 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 21 |
| 39 | 51.37 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 63 | 51.54 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 95 | 51.85 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 105 | 51.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 106 | 51.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 124 | 52.02 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 132 | 52.07 | radiation | 10 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 134 | 52.08 | humidity | 50 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 136 | 52.09 | humidity | 50 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 137 | 52.09 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 161 | 52.13 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 162 | 52.13 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 170 | 52.14 | humidity | 50 | 14400 | > th | dose independent | rect. | 22 | 16 |
| 176 | 52.15 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 221 | 52.18 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 223 | 52.19 | humidity | 50 | 14400 | < th | dose independent | sin | 5 | NA |
| 233 | 52.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 275 | 52.24 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 286 | 52.25 | humidity | 50 | 14400 | > th | dose independent | sin | 5 | NA |
| 303 | 52.27 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 321 | 52.28 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 365 | 52.35 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 403 | 52.38 | humidity | 60 | 14400 | < th | dose dependent | rect. | 18 | 19 |
| 451 | 52.45 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 458 | 52.46 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 462 | 52.47 | humidity | 50 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 488 | 52.49 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 529 | 52.51 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 15 |
| 530 | 52.52 | humidity | 50 | 14400 | < th | dose independent | no | NA | NA |
| 673 | 52.54 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 674 | 52.54 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 15 |
| 694 | 52.55 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 702 | 52.55 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 13 |
| 710 | 52.55 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 15 |
| 717 | 52.55 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 17 |
| 876 | 52.65 | humidity | 50 | 14400 | < th | dose dependent | rect. | 13 | 22 |
| 886 | 52.67 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 901 | 52.69 | temperature | 20 | 270 | > th | dose dependent | sin | 1 | NA |
| 903 | 52.69 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 913 | 52.71 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 920 | 52.71 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 22 |
| 951 | 52.73 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 8 |