Os01g0224400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0224400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Mitochondrial substrate carrier family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.71 | 0.247 | 8.96 | -0.212 | 0.839 | -0.772 | 0.245 | -0.0655 | -0.0566 | 7.76 | 26.16 | 9 | -- | -- |
| 27.67 | 0.247 | 8.96 | -0.22 | 0.837 | -0.765 | 0.253 | -- | -0.0583 | 7.75 | 26.22 | 7 | -- | -- |
| 27.83 | 0.248 | 8.96 | -0.193 | 0.837 | -0.771 | -- | -0.125 | -0.0534 | 7.76 | 26.16 | 9 | -- | -- |
| 27.86 | 0.247 | 8.96 | -0.213 | 0.837 | -0.763 | -- | -- | -0.0579 | 7.76 | 26.2 | 7 | -- | -- |
| 64.72 | 0.377 | 8.98 | -0.192 | -- | -0.892 | -- | -0.253 | -0.0454 | -- | 25.05 | 4 | -- | -- |
| 36.46 | 0.283 | 8.93 | -0.0415 | 0.86 | -- | 0.202 | -- | 0.107 | 8.64 | -- | -- | -- | -- |
| 36.59 | 0.283 | 8.93 | -0.0349 | 0.86 | -- | -- | -- | 0.107 | 8.64 | -- | -- | -- | -- |
| 64.84 | 0.377 | 8.99 | -0.229 | -- | -0.875 | -- | -- | -0.0536 | -- | 25.05 | 4 | -- | -- |
| 28.94 | 0.252 | 8.96 | -- | 0.836 | -0.683 | -- | -- | -0.019 | 7.87 | 26.2 | 6 | -- | -- |
| 78.24 | 0.413 | 8.95 | -0.0325 | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
| 36.63 | 0.283 | 8.93 | -- | 0.86 | -- | -- | -- | 0.111 | 8.64 | -- | -- | -- | -- |
| 66.13 | 0.38 | 8.98 | -- | -- | -0.801 | -- | -- | -0.0171 | -- | 25.1 | 2 | -- | -- |
| 78.27 | 0.413 | 8.95 | -- | -- | -- | -- | -- | 0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 21 |
| 9 | 27.96 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 18 | 28.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 33 | 28.16 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 37 | 28.21 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 39 | 28.25 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 45 | 28.27 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 48 | 28.28 | humidity | 50 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 55 | 28.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 57 | 28.31 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 58 | 28.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 66 | 28.38 | humidity | 50 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 83 | 28.39 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 120 | 28.52 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 2 |
| 139 | 28.62 | humidity | 50 | 14400 | < th | dose dependent | sin | 7 | NA |
| 167 | 28.69 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 9 | 11 |
| 188 | 28.77 | atmosphere | 1015 | 4320 | > th | dose dependent | sin | 21 | NA |
| 212 | 28.84 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 10 |
| 216 | 28.85 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 10 | 10 |
| 230 | 28.89 | temperature | 20 | 10 | > th | dose dependent | sin | 9 | NA |
| 248 | 28.94 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 321 | 29.04 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 338 | 29.06 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 13 | 7 |
| 358 | 29.09 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 20 |
| 389 | 29.14 | humidity | 50 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 443 | 29.21 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 459 | 29.21 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 12 |
| 466 | 29.22 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 473 | 29.23 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 474 | 29.23 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 486 | 29.24 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 505 | 29.25 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 23 | 22 |
| 515 | 29.26 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 1 | 20 |
| 520 | 29.27 | atmosphere | 1015 | 4320 | > th | dose independent | sin | 21 | NA |
| 566 | 29.29 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 594 | 29.31 | atmosphere | 1015 | 4320 | < th | dose independent | sin | 21 | NA |
| 599 | 29.31 | atmosphere | 1015 | 4320 | > th | dose dependent | no | NA | NA |
| 611 | 29.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 642 | 29.34 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 682 | 29.37 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 692 | 29.37 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 16 | 23 |
| 723 | 29.40 | temperature | 20 | 4320 | < th | dose dependent | sin | 3 | NA |
| 748 | 29.42 | temperature | 20 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 886 | 29.50 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 927 | 29.50 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 18 |