Os01g0221300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0221300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.43 | 0.295 | 8.92 | 1.06 | 0.885 | 0.925 | 0.113 | 0.576 | 0.241 | 19.3 | 20.7 | 1605 | -- | -- |
| 39.85 | 0.294 | 8.94 | 0.943 | 0.881 | 0.857 | 0.128 | -- | 0.196 | 19.3 | 20.9 | 1705 | -- | -- |
| 39.3 | 0.292 | 8.92 | 1.07 | 0.884 | 0.891 | -- | 0.543 | 0.24 | 19.3 | 20.9 | 1615 | -- | -- |
| 39.88 | 0.294 | 8.94 | 0.934 | 0.874 | 0.841 | -- | -- | 0.208 | 19.3 | 20.9 | 1721 | -- | -- |
| 73.19 | 0.398 | 8.89 | 1.16 | -- | 0.948 | -- | 0.366 | 0.213 | -- | 20.7 | 554 | -- | -- |
| 57.07 | 0.354 | 8.89 | 1.31 | 0.887 | -- | 0.228 | -- | 0.423 | 19.3 | -- | -- | -- | -- |
| 57.21 | 0.354 | 8.89 | 1.31 | 0.887 | -- | -- | -- | 0.423 | 19.3 | -- | -- | -- | -- |
| 73 | 0.398 | 8.92 | 0.977 | -- | 0.882 | -- | -- | 0.198 | -- | 20.78 | 555 | -- | -- |
| 52.12 | 0.336 | 8.98 | -- | 0.874 | 1.42 | -- | -- | 0.028 | 19.2 | 19.1 | 7780 | -- | -- |
| 98.99 | 0.465 | 8.87 | 1.29 | -- | -- | -- | -- | 0.408 | -- | -- | -- | -- | -- |
| 102.2 | 0.473 | 8.92 | -- | 0.875 | -- | -- | -- | 0.278 | 19.4 | -- | -- | -- | -- |
| 92.51 | 0.448 | 8.96 | -- | -- | 1.39 | -- | -- | 0.00967 | -- | 19.4 | 7877 | -- | -- |
| 142.99 | 0.558 | 8.9 | -- | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.99 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 5 | 39.33 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 6 | 39.35 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 11 | 39.68 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 23 | 40.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 32 | 40.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 57 | 40.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 76 | 40.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 21 |
| 87 | 40.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 93 | 40.48 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 123 | 40.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 177 | 40.66 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 191 | 40.67 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 221 | 40.74 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 255 | 40.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 321 | 40.95 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 340 | 40.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 440 | 41.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 461 | 41.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 496 | 41.46 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 14 |
| 521 | 41.52 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 21 |
| 525 | 41.55 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 23 |
| 572 | 41.66 | temperature | 15 | 270 | > th | dose dependent | sin | 8 | NA |
| 580 | 41.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 587 | 41.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 589 | 41.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 669 | 41.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 674 | 41.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 714 | 41.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 722 | 41.94 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 728 | 41.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 735 | 41.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 753 | 41.99 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 757 | 41.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 758 | 42.00 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 781 | 42.03 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 792 | 42.05 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 794 | 42.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 804 | 42.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 3 |
| 823 | 42.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 845 | 42.11 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 864 | 42.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 926 | 42.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 935 | 42.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 19 |