Os01g0219200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0219200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.27 | 0.55 | 4.12 | -0.371 | 0.532 | -0.596 | -0.673 | -2.51 | 0.467 | 4.92 | 1015 | 5043 | -- | -- |
| 141.82 | 0.555 | 4.2 | -0.877 | 0.524 | -0.471 | -0.591 | -- | 0.293 | 4.71 | 1012 | 15148 | -- | -- |
| 138.38 | 0.548 | 4.12 | -0.375 | 0.522 | -0.58 | -- | -2.42 | 0.466 | 4.75 | 1015 | 5077 | -- | -- |
| 142.02 | 0.555 | 4.19 | -0.912 | 0.517 | -0.465 | -- | -- | 0.302 | 4.79 | 1013 | 21838 | -- | -- |
| 152.97 | 0.576 | 4.14 | -0.338 | -- | -0.412 | -- | -1.98 | 0.484 | -- | 1014 | 5100 | -- | -- |
| 151.11 | 0.576 | 4.16 | -0.652 | 0.529 | -- | -0.604 | -- | 0.437 | 4.9 | -- | -- | -- | -- |
| 152.03 | 0.577 | 4.16 | -0.651 | 0.525 | -- | -- | -- | 0.44 | 4.77 | -- | -- | -- | -- |
| 155.88 | 0.582 | 4.2 | -0.914 | -- | -0.522 | -- | -- | 0.294 | -- | 1013 | 22149 | -- | -- |
| 160.23 | 0.59 | 4.16 | -- | 0.51 | -0.227 | -- | -- | 0.456 | 4.83 | 1011 | 19684 | -- | -- |
| 166.59 | 0.603 | 4.16 | -0.631 | -- | -- | -- | -- | 0.454 | -- | -- | -- | -- | -- |
| 163.19 | 0.598 | 4.14 | -- | 0.513 | -- | -- | -- | 0.513 | 4.81 | -- | -- | -- | -- |
| 173.72 | 0.614 | 4.16 | -- | -- | -0.249 | -- | -- | 0.461 | -- | 1011 | 19707 | -- | -- |
| 177.1 | 0.621 | 4.15 | -- | -- | -- | -- | -- | 0.524 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.33 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 2 | 130.77 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 3 | 130.77 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 19 | 133.60 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 32 | 134.40 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 33 | 134.48 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 41 | 134.73 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 42 | 134.75 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 44 | 134.77 | wind | 1 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 49 | 134.84 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 50 | 134.85 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 52 | 134.87 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 84 | 135.23 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 107 | 135.54 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 119 | 135.65 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 139 | 135.87 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 142 | 135.90 | humidity | 50 | 14400 | > th | dose independent | sin | 7 | NA |
| 148 | 135.95 | humidity | 50 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 152 | 135.96 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 159 | 135.96 | humidity | 50 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 165 | 135.97 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 198 | 136.00 | humidity | 50 | 14400 | < th | dose dependent | sin | 9 | NA |
| 219 | 136.05 | humidity | 50 | 14400 | < th | dose independent | sin | 9 | NA |
| 223 | 136.07 | wind | 1 | 14400 | < th | dose dependent | sin | 8 | NA |
| 225 | 136.08 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 226 | 136.08 | humidity | 50 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 282 | 136.16 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 344 | 136.24 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 375 | 136.31 | humidity | 50 | 14400 | > th | dose independent | rect. | 5 | 18 |
| 376 | 136.31 | humidity | 50 | 14400 | > th | dose independent | rect. | 5 | 20 |
| 381 | 136.32 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 385 | 136.32 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 13 |
| 471 | 136.33 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 521 | 136.41 | humidity | 50 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 529 | 136.43 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 597 | 136.54 | humidity | 80 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 647 | 136.59 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 663 | 136.62 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 916 | 136.79 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 941 | 136.82 | wind | 1 | 14400 | < th | dose independent | sin | 8 | NA |
| 948 | 136.85 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 975 | 136.89 | radiation | 10 | 4320 | < th | dose dependent | rect. | 11 | 7 |
| 979 | 136.90 | humidity | 60 | 14400 | < th | dose dependent | rect. | 8 | 1 |