Os01g0218700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter, transmembrane region, type 1 domain containing protein.
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Os01g0218700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter, transmembrane region, type 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.62 | 0.238 | 12.8 | -0.237 | 0.396 | -0.911 | 0.685 | 1.99 | -0.0523 | 5.51 | 19.14 | 271 | -- | -- |
| 27.75 | 0.245 | 12.8 | -0.583 | 0.435 | -1 | 0.0269 | -- | -0.154 | 4.55 | 13.71 | 403 | -- | -- |
| 26.48 | 0.24 | 12.8 | -0.28 | 0.395 | -0.92 | -- | 1.57 | -0.0625 | 4.86 | 19.07 | 330 | -- | -- |
| 27.75 | 0.245 | 12.8 | -0.583 | 0.432 | -1.01 | -- | -- | -0.154 | 4.57 | 13.76 | 395 | -- | -- |
| 31.71 | 0.262 | 12.8 | -0.125 | -- | -1.23 | -- | 2.23 | -0.0138 | -- | 21.96 | 299 | -- | -- |
| 38.71 | 0.292 | 12.8 | -0.803 | 0.705 | -- | 0.296 | -- | -0.3 | 5.1 | -- | -- | -- | -- |
| 38.93 | 0.292 | 12.8 | -0.804 | 0.706 | -- | -- | -- | -0.301 | 5.05 | -- | -- | -- | -- |
| 34.14 | 0.272 | 12.8 | -0.501 | -- | -1.32 | -- | -- | -0.0927 | -- | 16.52 | 305 | -- | -- |
| 35.79 | 0.279 | 12.8 | -- | 0.354 | -1.28 | -- | -- | -0.0557 | 4.31 | 13.41 | 403 | -- | -- |
| 65.11 | 0.377 | 12.8 | -0.778 | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
| 55.95 | 0.35 | 12.8 | -- | 0.692 | -- | -- | -- | -0.212 | 5.08 | -- | -- | -- | -- |
| 40.07 | 0.295 | 12.8 | -- | -- | -1.47 | -- | -- | -0.0148 | -- | 16.21 | 319 | -- | -- |
| 81.08 | 0.42 | 12.8 | -- | -- | -- | -- | -- | -0.197 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.87 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 3 | 24.39 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 13 | 24.39 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 16 | 24.44 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 18 | 24.46 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 19 | 24.48 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 23 | 24.51 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 28 | 24.57 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 34 | 24.58 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 38 | 24.59 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 41 | 24.60 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 45 | 24.61 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 66 | 24.74 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 70 | 24.77 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 73 | 24.80 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 80 | 24.83 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 83 | 24.86 | humidity | 60 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 85 | 24.86 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 86 | 24.88 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 88 | 24.90 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 89 | 24.90 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 93 | 24.94 | humidity | 60 | 43200 | < th | dose independent | sin | 9 | NA |
| 95 | 24.94 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 99 | 24.95 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 105 | 24.96 | humidity | 60 | 43200 | < th | dose dependent | rect. | 18 | 17 |
| 111 | 24.98 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 112 | 24.99 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 124 | 25.02 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 128 | 25.02 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 132 | 25.03 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 149 | 25.04 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 22 | 11 |
| 153 | 25.05 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 154 | 25.05 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 165 | 25.06 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 186 | 25.07 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 231 | 25.09 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 7 | NA |
| 254 | 25.10 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 313 | 25.12 | humidity | 60 | 43200 | < th | dose dependent | sin | 10 | NA |
| 336 | 25.13 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 360 | 25.14 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 375 | 25.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 396 | 25.15 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 8 | NA |
| 398 | 25.15 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 479 | 25.17 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 551 | 25.18 | temperature | 20 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 552 | 25.18 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 566 | 25.18 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 22 |
| 577 | 25.19 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 579 | 25.19 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 593 | 25.19 | atmosphere | 1005 | 43200 | > th | dose dependent | no | NA | NA |
| 614 | 25.19 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 22 |
| 656 | 25.20 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 6 | 20 |
| 668 | 25.20 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 675 | 25.21 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 688 | 25.21 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 732 | 25.22 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 736 | 25.22 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 741 | 25.22 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 18 | 16 |
| 755 | 25.22 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 11 |
| 784 | 25.23 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 804 | 25.23 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 898 | 25.25 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 907 | 25.25 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 916 | 25.25 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 5 | 21 |
| 951 | 25.26 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 8 | NA |
| 972 | 25.26 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 983 | 25.26 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 5 | 19 |