Os01g0217800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DJ-1 family protein.
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Os01g0217800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DJ-1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.93 | 0.265 | 9.98 | -0.4 | 0.943 | 1.39 | 0.107 | -1.48 | 0.0465 | 23.5 | 5.765 | 1115 | -- | -- |
| 33.62 | 0.27 | 9.95 | -0.113 | 0.91 | 1.41 | -0.0892 | -- | 0.119 | 23.6 | 4.943 | 1056 | -- | -- |
| 31.97 | 0.263 | 9.98 | -0.392 | 0.929 | 1.4 | -- | -1.43 | 0.0477 | 23.5 | 5.559 | 1084 | -- | -- |
| 33.63 | 0.27 | 9.94 | -0.0956 | 0.915 | 1.39 | -- | -- | 0.129 | 23.6 | 7.397 | 1063 | -- | -- |
| 75.02 | 0.403 | 9.97 | -0.477 | -- | 2.06 | -- | -1.3 | -0.0176 | -- | 7.876 | 910 | -- | -- |
| 62.86 | 0.372 | 9.89 | 0.305 | 1.13 | -- | -0.00499 | -- | 0.364 | 23.6 | -- | -- | -- | -- |
| 62.86 | 0.371 | 9.89 | 0.305 | 1.13 | -- | -- | -- | 0.364 | 23.6 | -- | -- | -- | -- |
| 76.43 | 0.407 | 9.94 | -0.226 | -- | 2.04 | -- | -- | 0.0487 | -- | 8.364 | 909 | -- | -- |
| 33.84 | 0.271 | 9.94 | -- | 0.922 | 1.35 | -- | -- | 0.145 | 23.6 | 9.026 | 1063 | -- | -- |
| 143.17 | 0.559 | 9.87 | 0.337 | -- | -- | -- | -- | 0.377 | -- | -- | -- | -- | -- |
| 65.32 | 0.378 | 9.9 | -- | 1.13 | -- | -- | -- | 0.33 | 23.6 | -- | -- | -- | -- |
| 77.62 | 0.41 | 9.93 | -- | -- | 1.95 | -- | -- | 0.086 | -- | 9.181 | 905 | -- | -- |
| 146.17 | 0.564 | 9.88 | -- | -- | -- | -- | -- | 0.34 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.06 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 39 | 32.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 64 | 32.62 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 78 | 32.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 103 | 32.80 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 220 | 33.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 264 | 33.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 22 |
| 287 | 33.13 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 360 | 33.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 384 | 33.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 503 | 33.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 587 | 33.39 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 613 | 33.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 623 | 33.43 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 790 | 33.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 921 | 33.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |