Os01g0209000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alg9-like mannosyltransferase family protein.
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Os01g0209000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alg9-like mannosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.56 | 0.238 | 10.8 | 1.31 | 0.441 | -0.548 | -0.381 | 0.87 | 0.394 | 15.1 | 20.08 | 1288 | -- | -- |
| 26.2 | 0.238 | 10.9 | 1.05 | 0.442 | -0.496 | -0.473 | -- | 0.316 | 15.2 | 20.43 | 1211 | -- | -- |
| 25.47 | 0.235 | 10.8 | 1.43 | 0.424 | -0.595 | -- | 1.44 | 0.418 | 15.6 | 22.17 | 1134 | -- | -- |
| 26.85 | 0.241 | 10.9 | 1.04 | 0.431 | -0.507 | -- | -- | 0.318 | 15.4 | 20.34 | 1167 | -- | -- |
| 35.07 | 0.276 | 10.8 | 1.51 | -- | -0.76 | -- | 1.86 | 0.411 | -- | 23.78 | 1163 | -- | -- |
| 33.45 | 0.271 | 10.9 | 0.882 | 0.502 | -- | -0.41 | -- | 0.211 | 15 | -- | -- | -- | -- |
| 34.01 | 0.273 | 10.9 | 0.873 | 0.501 | -- | -- | -- | 0.208 | 15 | -- | -- | -- | -- |
| 36.65 | 0.282 | 10.9 | 1.07 | -- | -0.771 | -- | -- | 0.351 | -- | 16.7 | 1138 | -- | -- |
| 51.74 | 0.335 | 10.9 | -- | 0.611 | -0.351 | -- | -- | 0.165 | 15.4 | 21.48 | 370 | -- | -- |
| 48.39 | 0.325 | 10.9 | 0.852 | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
| 54.12 | 0.344 | 10.9 | -- | 0.483 | -- | -- | -- | 0.111 | 15 | -- | -- | -- | -- |
| 63.34 | 0.371 | 10.9 | -- | -- | -0.34 | -- | -- | 0.155 | -- | 22.8 | 1142 | -- | -- |
| 67.54 | 0.384 | 10.9 | -- | -- | -- | -- | -- | 0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 21 |
| 7 | 23.35 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 16 | 23.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 8 | 18 |
| 17 | 23.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 55 | 23.97 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 19 |
| 56 | 23.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 21 |
| 93 | 24.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 15 |
| 119 | 24.52 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 10 |
| 120 | 24.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 18 |
| 155 | 24.71 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 16 |
| 159 | 24.72 | temperature | 10 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 194 | 24.96 | temperature | 10 | 10 | > th | dose dependent | sin | 15 | NA |
| 207 | 25.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 221 | 25.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 229 | 25.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 239 | 25.11 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 241 | 25.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 244 | 25.13 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 11 |
| 358 | 25.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 360 | 25.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 367 | 25.31 | temperature | 30 | 10 | < th | dose dependent | sin | 15 | NA |
| 377 | 25.32 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 399 | 25.35 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 11 |
| 412 | 25.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 450 | 25.38 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 574 | 25.46 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 591 | 25.47 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 646 | 25.50 | temperature | 30 | 270 | < th | dose dependent | sin | 19 | NA |
| 730 | 25.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 734 | 25.55 | temperature | 10 | 1440 | > th | dose dependent | sin | 18 | NA |
| 890 | 25.65 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 904 | 25.66 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 18 |
| 905 | 25.66 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 997 | 25.71 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 998 | 25.71 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 5 |