Os01g0208800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphoenolpyruvate carboxylase (Fragment).
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Os01g0208800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphoenolpyruvate carboxylase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.51 | 0.306 | 2.78 | -0.132 | 0.0533 | -0.00448 | -0.33 | 1.21 | 0.00894 | 7.96 | 2.3 | 4514 | -- | -- |
| 44.35 | 0.31 | 2.81 | -0.027 | 0.0617 | -0.0942 | -0.302 | -- | 0.015 | 7.96 | 4.2 | 5010 | -- | -- |
| 42.82 | 0.305 | 2.78 | -0.135 | 0.0516 | 0.00415 | -- | 1.18 | 0.0151 | 7.99 | 2.004 | 4457 | -- | -- |
| 44.61 | 0.313 | 2.81 | -0.081 | 0.0356 | 0.0406 | -- | -- | 0.0261 | 10.6 | 2.285 | 6503 | -- | -- |
| 42.96 | 0.305 | 2.78 | -0.144 | -- | 0.0232 | -- | 1.2 | 0.0212 | -- | 2 | 4457 | -- | -- |
| 44.44 | 0.313 | 2.81 | -0.0569 | 0.0463 | -- | -0.29 | -- | 0.0257 | 8.13 | -- | -- | -- | -- |
| 44.7 | 0.313 | 2.81 | -0.0653 | 0.0469 | -- | -- | -- | 0.0258 | 7.91 | -- | -- | -- | -- |
| 44.69 | 0.313 | 2.81 | -0.0796 | -- | 0.0375 | -- | -- | 0.0254 | -- | 2.9 | 8020 | -- | -- |
| 44.62 | 0.311 | 2.81 | -- | 0.0651 | -0.101 | -- | -- | 0.0384 | 10.3 | 7.6 | 12752 | -- | -- |
| 44.82 | 0.313 | 2.81 | -0.0648 | -- | -- | -- | -- | 0.0264 | -- | -- | -- | -- | -- |
| 44.81 | 0.313 | 2.81 | -- | 0.0465 | -- | -- | -- | 0.0331 | 8.01 | -- | -- | -- | -- |
| 44.64 | 0.311 | 2.81 | -- | -- | -0.116 | -- | -- | 0.0344 | -- | 7.6 | 12752 | -- | -- |
| 44.93 | 0.313 | 2.81 | -- | -- | -- | -- | -- | 0.0336 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.87 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 3 |
| 3 | 32.64 | temperature | 20.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 6 | 32.64 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 34 | 35.05 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 3 |
| 40 | 36.12 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 6 | 2 |
| 41 | 36.13 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 6 | 4 |
| 125 | 38.62 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 2 |
| 127 | 38.65 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 251 | 40.25 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 288 | 40.57 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 7 | 2 |
| 305 | 40.63 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 311 | 40.66 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 315 | 40.68 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 318 | 40.69 | humidity | 70.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 327 | 40.74 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 362 | 40.95 | radiation | 20.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 364 | 40.96 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 414 | 41.21 | temperature | 25.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 416 | 41.22 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 450 | 41.35 | temperature | 25.0 | 10 | > th | dose independent | rect. | 18 | 2 |
| 461 | 41.38 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 462 | 41.38 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 464 | 41.38 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 3 | 5 |
| 483 | 41.45 | radiation | 1.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 514 | 41.52 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 523 | 41.54 | humidity | 90.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 529 | 41.55 | wind | 3.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 530 | 41.55 | wind | 7.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 542 | 41.56 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 545 | 41.56 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 5 |
| 549 | 41.57 | temperature | 10.0 | 30 | > th | dose independent | rect. | 18 | 1 |
| 552 | 41.57 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 557 | 41.57 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 18 | 1 |
| 558 | 41.57 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 13 |
| 559 | 41.57 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 23 |
| 560 | 41.57 | wind | 1.0 | 30 | > th | dose dependent | rect. | 18 | 1 |
| 561 | 41.57 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 566 | 41.58 | humidity | 90.0 | 30 | < th | dose independent | rect. | 18 | 1 |
| 580 | 41.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 583 | 41.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 587 | 41.59 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 590 | 41.59 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 594 | 41.59 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 614 | 41.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 618 | 41.59 | wind | 9.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 621 | 41.59 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 678 | 41.64 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 6 | 13 |
| 681 | 41.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 712 | 41.68 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 791 | 41.77 | wind | 1.0 | 30 | > th | dose independent | rect. | 18 | 17 |
| 799 | 41.78 | radiation | 40.0 | 10 | < th | dose independent | rect. | 18 | 17 |
| 802 | 41.79 | wind | 5.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 807 | 41.79 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 18 | 1 |
| 833 | 41.83 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 18 | 5 |
| 837 | 41.83 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 18 | 17 |
| 841 | 41.85 | wind | 5.0 | 30 | < th | dose independent | rect. | 18 | 17 |
| 891 | 41.90 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 23 |
| 898 | 41.91 | humidity | 60.0 | 30 | > th | dose independent | rect. | 18 | 17 |
| 913 | 41.93 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 915 | 41.93 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 929 | 41.95 | radiation | 10.0 | 10 | < th | dose independent | sin | 9 | NA |
| 931 | 41.95 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 944 | 41.96 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 15 |
| 965 | 41.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 23 |
| 969 | 41.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 23 |