Os01g0208600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Actin-binding WH2 domain containing protein.
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Os01g0208600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Actin-binding WH2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.01 | 0.326 | 6.83 | 1.3 | 0.724 | -0.0835 | -0.0869 | 4.32 | 0.37 | 5.8 | 29.1 | 3989 | -- | -- |
| 48.98 | 0.326 | 6.92 | 0.612 | 0.784 | 0.409 | 0.198 | -- | 0.296 | 5.62 | 28.1 | 4914 | -- | -- |
| 48.02 | 0.323 | 6.83 | 1.36 | 0.727 | -0.126 | -- | 4.72 | 0.379 | 5.79 | 28.94 | 3528 | -- | -- |
| 48.57 | 0.325 | 6.93 | 0.561 | 0.726 | 0.365 | -- | -- | 0.295 | 5.72 | 28.66 | 5755 | -- | -- |
| 73.68 | 0.4 | 6.77 | 1.97 | -- | -0.349 | -- | 6.76 | 0.484 | -- | 28.49 | 2704 | -- | -- |
| 55.41 | 0.349 | 6.93 | 0.684 | 0.748 | -- | -0.0426 | -- | 0.275 | 5.64 | -- | -- | -- | -- |
| 55.41 | 0.349 | 6.93 | 0.684 | 0.748 | -- | -- | -- | 0.276 | 5.65 | -- | -- | -- | -- |
| 75.13 | 0.404 | 6.93 | 0.575 | -- | 0.424 | -- | -- | 0.352 | -- | 29.4 | 5675 | -- | -- |
| 55.66 | 0.347 | 6.98 | -- | 0.74 | 0.656 | -- | -- | 0.139 | 5.76 | 24.24 | 5772 | -- | -- |
| 84.48 | 0.429 | 6.94 | 0.707 | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
| 67.73 | 0.385 | 6.95 | -- | 0.759 | -- | -- | -- | 0.199 | 5.61 | -- | -- | -- | -- |
| 82.49 | 0.423 | 6.98 | -- | -- | 0.621 | -- | -- | 0.138 | -- | 23.45 | 5652 | -- | -- |
| 97.68 | 0.461 | 6.96 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 7 |
| 2 | 47.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 3 | 47.36 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 6 | 47.37 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 11 | 47.43 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 19 | 47.47 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 24 | 47.50 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 31 | 47.53 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 33 | 47.54 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 35 | 47.57 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 41 | 47.58 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 71 | 47.65 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 81 | 47.68 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 90 | 47.69 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 99 | 47.71 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 140 | 47.76 | temperature | 30 | 1440 | > th | dose independent | sin | 6 | NA |
| 161 | 47.78 | temperature | 25 | 4320 | > th | dose independent | sin | 10 | NA |
| 167 | 47.79 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 174 | 47.81 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 195 | 47.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 198 | 47.84 | temperature | 30 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 210 | 47.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 212 | 47.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 219 | 47.88 | temperature | 30 | 1440 | < th | dose independent | sin | 7 | NA |
| 230 | 47.89 | temperature | 25 | 4320 | < th | dose independent | sin | 10 | NA |
| 233 | 47.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 241 | 47.90 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 247 | 47.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 260 | 47.92 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 16 |
| 261 | 47.92 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 4 |
| 304 | 47.95 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 313 | 47.96 | temperature | 25 | 4320 | > th | dose dependent | sin | 11 | NA |
| 367 | 47.99 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 405 | 48.01 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 434 | 48.04 | temperature | 30 | 4320 | < th | dose independent | rect. | 10 | 8 |
| 567 | 48.09 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 670 | 48.12 | temperature | 30 | 4320 | < th | dose independent | rect. | 3 | 15 |
| 682 | 48.12 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 22 |
| 782 | 48.16 | temperature | 30 | 4320 | > th | dose independent | sin | 18 | NA |
| 834 | 48.16 | temperature | 30 | 4320 | > th | dose dependent | sin | 3 | NA |
| 840 | 48.17 | temperature | 30 | 4320 | < th | dose independent | sin | 16 | NA |
| 844 | 48.17 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 845 | 48.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 943 | 48.20 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |