Os01g0200400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Thioredoxin domain 2 containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0200400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Thioredoxin domain 2 containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.38 | 0.33 | 9.58 | -1.5 | 1.27e-05 | 1.71 | -0.602 | -1.46 | -0.266 | 19.2 | 11.18 | 861 | -- | -- |
| 51.13 | 0.333 | 9.56 | -1.25 | 0.115 | 1.66 | -0.853 | -- | -0.209 | 19.6 | 14.2 | 982 | -- | -- |
| 50.12 | 0.33 | 9.59 | -1.54 | 0.0667 | 1.7 | -- | -1.81 | -0.278 | 3.44 | 10.19 | 819 | -- | -- |
| 52.72 | 0.338 | 9.55 | -1.2 | 0.0978 | 1.61 | -- | -- | -0.19 | 19.9 | 14.2 | 967 | -- | -- |
| 50.27 | 0.33 | 9.59 | -1.54 | -- | 1.7 | -- | -1.78 | -0.281 | -- | 9.936 | 857 | -- | -- |
| 89.1 | 0.443 | 9.5 | -0.777 | 0.359 | -- | -0.501 | -- | 0.073 | 22 | -- | -- | -- | -- |
| 90.05 | 0.444 | 9.5 | -0.758 | 0.36 | -- | -- | -- | 0.0735 | 22.2 | -- | -- | -- | -- |
| 52.83 | 0.339 | 9.55 | -1.21 | -- | 1.68 | -- | -- | -0.194 | -- | 10.94 | 885 | -- | -- |
| 86.23 | 0.432 | 9.51 | -- | 0.129 | 1.11 | -- | -- | 0.0153 | 22.5 | 13.76 | 845 | -- | -- |
| 97.93 | 0.462 | 9.49 | -0.753 | -- | -- | -- | -- | 0.0743 | -- | -- | -- | -- | -- |
| 105.19 | 0.48 | 9.48 | -- | 0.357 | -- | -- | -- | 0.158 | 22.1 | -- | -- | -- | -- |
| 87.08 | 0.435 | 9.51 | -- | -- | 1.2 | -- | -- | 0.00464 | -- | 12.59 | 827 | -- | -- |
| 112.87 | 0.496 | 9.47 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 2 | 49.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 27 | 49.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 28 | 49.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 30 | 49.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 31 | 49.85 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 37 | 49.90 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 39 | 49.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 45 | 49.95 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 49 | 49.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 22 |
| 69 | 50.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 78 | 50.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 112 | 50.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 117 | 50.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 142 | 50.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 146 | 50.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 165 | 50.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 169 | 50.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 289 | 51.17 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 642 | 51.66 | temperature | 10 | 1440 | > th | dose dependent | sin | 1 | NA |
| 787 | 51.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 12 |