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Os01g0198100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.05 (0.0352) R2 : 0.424
β1 : 1.76 (0.128) R2dD : 0.249 R2D : 0.276
β2 : 0.612 (0.0921) R2dC : 0.0571 R2C : 0.0384
β3 : 2.13 (0.244) R2dE : 0.104 R2E : 0.104
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0935 (0.0769) R2dN8 : 0.00266 R2N8 : 0.0171
σ : 0.658
deviance : 196.8
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C
peak time of C : 5.82
E
wheather : wind
threshold : 20.12
memory length : 4
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.22
open length of G : 23.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
191.87 0.651 6.04 1.65 0.616 2.53 0.549 4.6 -0.112 5.73 5 1 3 23
196.47 0.658 6.05 1.76 0.609 2.11 0.366 -- -0.0931 5.85 15.35 4 3.1 23.3
196.31 0.658 6.04 1.71 0.612 2.41 -- 3.59 -0.093 5.82 15.5 20 3.47 23.3
196.8 0.658 6.05 1.76 0.612 2.13 -- -- -0.0935 5.82 20.12 4 3.22 23.2
215.35 0.687 6.06 1.73 -- 2.19 -- 3.61 -0.0957 -- 15.5 20 3.47 23.3
228.27 0.708 6.08 1.76 0.509 -- 0.546 -- -0.252 6.47 -- -- -- --
229.01 0.709 6.08 1.77 0.511 -- -- -- -0.254 6.51 -- -- -- --
215.85 0.687 6.06 1.78 -- 1.9 -- -- -0.0963 -- 47.06 5 3.26 23.2
278.84 0.782 6.09 -- 0.64 2.13 -- -- -0.29 5.69 23.77 6 3.45 23.2
242.62 0.728 6.09 1.78 -- -- -- -- -0.243 -- -- -- -- --
311.25 0.825 6.13 -- 0.535 -- -- -- -0.451 6.33 -- -- -- --
299.67 0.809 6.11 -- -- 1.89 -- -- -0.295 -- 52.55 6 3.48 23.2
326.12 0.843 6.14 -- -- -- -- -- -0.441 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 191.87 wind 9.0 10 < th dose independent rect. 3 23
2 191.90 wind 1.0 10 < th dose independent rect. 2 2
3 192.19 temperature 20.0 90 > th dose independent rect. 1 2
4 193.06 humidity 90.0 10 > th dose dependent rect. 2 1
5 193.16 temperature 20.0 10 > th dose independent rect. 2 1
7 193.35 precipitation 0.1 10 < th dose independent rect. 3 23
8 193.35 precipitation 0.1 10 < th dose dependent rect. 3 23
12 193.70 humidity 90.0 10 > th dose independent rect. 2 1
14 193.81 atmosphere 1000.0 10 > th dose independent rect. 2 1
17 193.92 temperature 15.0 10 > th dose dependent rect. 2 1
20 194.18 wind 9.0 10 < th dose independent rect. 2 1
21 194.18 temperature 10.0 10 > th dose independent rect. 2 1
23 194.18 temperature 30.0 10 < th dose independent rect. 2 1
24 194.18 humidity 50.0 10 > th dose independent rect. 2 1
28 194.18 atmosphere 1010.0 10 < th dose independent rect. 2 1
30 194.18 radiation 1.0 10 < th dose independent rect. 2 1
35 194.18 precipitation 0.1 10 < th dose independent rect. 2 1
36 194.18 temperature 10.0 10 > th dose independent rect. 3 23
37 194.18 radiation 1.0 10 < th dose dependent rect. 2 1
42 194.18 precipitation 0.1 10 < th dose dependent rect. 2 1
43 194.20 atmosphere 1015.0 10 < th dose dependent rect. 2 1
44 194.42 wind 5.0 10 < th dose independent rect. 2 1
46 194.47 temperature 20.0 90 > th dose dependent rect. 1 2
49 194.51 wind 9.0 10 < th dose dependent rect. 2 1
50 194.57 atmosphere 995.0 10 > th dose dependent rect. 2 1
57 194.83 wind 1.0 30 > th dose independent rect. 2 1
70 195.10 temperature 30.0 10 < th dose dependent rect. 2 1
123 199.30 temperature 20.0 10 > th dose independent rect. 1 3
124 199.49 atmosphere 995.0 10 > th dose independent rect. 3 23
129 200.36 wind 1.0 30 < th dose independent rect. 23 5
133 200.55 wind 1.0 30 < th dose independent rect. 15 13
152 201.12 wind 1.0 30 < th dose independent rect. 11 17
171 202.30 radiation 1.0 4320 < th dose dependent rect. 3 1
172 202.38 humidity 50.0 30 > th dose independent rect. 3 23
175 202.40 wind 9.0 1440 < th dose independent rect. 3 1
176 202.40 temperature 10.0 1440 > th dose independent rect. 3 1
179 202.40 temperature 30.0 1440 < th dose independent rect. 3 1
183 202.40 humidity 50.0 1440 > th dose independent rect. 3 1
192 202.40 atmosphere 995.0 1440 > th dose independent rect. 3 1
193 202.40 radiation 1.0 1440 < th dose independent rect. 3 1
213 202.40 temperature 10.0 1440 > th dose independent rect. 4 23
256 203.57 temperature 20.0 10 > th dose independent rect. 8 20
263 203.72 wind 1.0 30 < th dose independent rect. 8 20
336 205.74 temperature 20.0 270 > th dose independent rect. 5 22
366 207.02 temperature 20.0 10 > th dose independent rect. 19 9
368 207.05 wind 1.0 30 > th dose dependent rect. 2 1
372 207.15 temperature 10.0 90 > th dose dependent rect. 7 20
380 207.49 temperature 20.0 10 > th dose independent rect. 17 11
384 207.62 temperature 15.0 10 > th dose dependent rect. 7 21
391 207.80 temperature 20.0 270 > th dose independent rect. 22 12
425 208.04 humidity 80.0 14400 > th dose dependent rect. 5 1
426 208.07 humidity 50.0 14400 > th dose dependent rect. 5 1
428 208.09 temperature 30.0 90 < th dose independent rect. 3 22
446 208.39 humidity 80.0 14400 > th dose dependent rect. 4 3
448 208.45 wind 9.0 30 < th dose dependent rect. 3 23
450 208.54 temperature 20.0 10 > th dose independent rect. 13 15
466 208.92 temperature 20.0 90 > th dose independent rect. 13 14
473 209.19 wind 1.0 10 > th dose independent sin 17 NA
509 209.77 atmosphere 995.0 30 > th dose dependent rect. 3 23
563 210.13 humidity 80.0 720 < th dose dependent rect. 19 2
604 210.50 humidity 90.0 14400 > th dose independent rect. 5 2
605 210.52 humidity 90.0 14400 < th dose independent rect. 5 2
639 210.87 temperature 15.0 10 > th dose dependent rect. 19 9
649 210.96 humidity 90.0 14400 > th dose independent rect. 22 1
657 211.04 humidity 90.0 14400 < th dose independent rect. 1 8
667 211.11 humidity 90.0 14400 < th dose independent rect. 22 1
670 211.14 temperature 20.0 270 > th dose independent rect. 22 23
672 211.16 humidity 90.0 14400 < th dose independent rect. 17 16
692 211.18 humidity 90.0 14400 < th dose independent rect. 21 13
706 211.23 atmosphere 1015.0 30 < th dose independent rect. 3 23
711 211.26 wind 1.0 10 > th dose independent rect. 21 23
720 211.31 humidity 90.0 14400 > th dose independent rect. 16 17
733 211.36 humidity 90.0 14400 < th dose independent sin 8 NA
738 211.37 radiation 20.0 14400 < th dose independent rect. 5 1
762 211.42 temperature 30.0 30 < th dose dependent rect. 3 23
786 211.51 temperature 20.0 1440 > th dose independent rect. 6 1
824 211.62 humidity 80.0 720 < th dose independent rect. 19 2
834 211.64 wind 1.0 30 > th dose independent rect. 3 23
856 211.70 humidity 90.0 14400 < th dose independent rect. 17 9
862 211.71 humidity 90.0 14400 > th dose independent sin 7 NA
863 211.71 humidity 90.0 14400 > th dose independent rect. 18 7
869 211.72 humidity 90.0 14400 > th dose independent rect. 24 11
884 211.75 humidity 90.0 14400 > th dose independent rect. 16 11
890 211.75 wind 1.0 30 < th dose dependent rect. 15 13
897 211.77 humidity 90.0 14400 > th dose independent sin 14 NA