BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0198100 Os01g0198100|AK119908
         (456 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19910.1  | chr2:8595820-8600757 REVERSE LENGTH=993            119   4e-27
AT2G19930.1  | chr2:8607533-8612441 REVERSE LENGTH=978            115   6e-26
AT2G19920.1  | chr2:8602222-8606887 REVERSE LENGTH=928            113   3e-25

>AT2G19910.1 | chr2:8595820-8600757 REVERSE LENGTH=993
          Length = 992

 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 17/171 (9%)

Query: 277 PQMLALGELEFRKIFMIFAYLSWNKKGVKPPLSTPKSSKIEDVLSVDSIRSLKSMSMAQF 336
           P +LALGELEF+K F++ +Y+                S +E+V+S D IR  K + M  +
Sbjct: 138 PPLLALGELEFKKAFLLLSYIG-------------GESLVEEVISGDQIRKWKDLPMVSY 184

Query: 337 ESRIWSTFGHDNISSSDRAKNLDSGPGMSKVYHCNVEIRGGTVVKIFKGPYIENRRTHLQ 396
           E+ +W+  G    S  +R + L+   GM+  Y C+V   G      FKG  +EN  THL 
Sbjct: 185 EAAVWNRLGQRYCSPKERRRPLEGDSGMTHYYQCHVATDGSYK---FKGHLLENTGTHLH 241

Query: 397 KVLGDDNVLVVKFMEISSDTETDLSTYLEHYHKVAEEGIVLGLRCYRFFLY 447
           KVLGDDNVL VKF ++    ET  +     Y  +A+ GI++GLR YRFF++
Sbjct: 242 KVLGDDNVLTVKFDKVLG-VETYCNDLYSTYKGIAKNGIMVGLRRYRFFVF 291



>AT2G19930.1 | chr2:8607533-8612441 REVERSE LENGTH=978
          Length = 977

 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 18/174 (10%)

Query: 277 PQMLALGELEFRKIFMIFAYLSWNKKGVKPPLSTPKSSKIEDVLSVDSIRSLKSMSMAQF 336
           PQ++ALGELEF+K+F++ +Y+     G               V++ D IR  K + M ++
Sbjct: 129 PQLVALGELEFKKVFLLLSYIPGQHVG--------------QVITADEIRLWKDLPMVEY 174

Query: 337 ESRIWSTFGHDNISSSDRAKNLDSGPGMSKVYHCNVEIRGGTVVKIF---KGPYIENRRT 393
           E+ +W   G       DR + L    G +  Y CNV   G    K+    +GP +E+  T
Sbjct: 175 EAAVWDRLGRHYCPQKDR-RMLQWDSGKTHYYQCNVAPNGSYTFKVLSALQGPLLEHTGT 233

Query: 394 HLQKVLGDDNVLVVKFMEISSDTETDLSTYLEHYHKVAEEGIVLGLRCYRFFLY 447
           HL KVLGDDNVL VKF ++   + T    +   Y  +A+ GI++GLR Y+FF++
Sbjct: 234 HLHKVLGDDNVLTVKFADVQKSSSTYSIDHYFTYKGIAKNGIMIGLRRYQFFVF 287



>AT2G19920.1 | chr2:8602222-8606887 REVERSE LENGTH=928
          Length = 927

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 31/181 (17%)

Query: 279 MLALGELEFRKIFMIFAYLSWNKKGVKPPLSTPKSSKIEDVLSVDSIRSLKSMSMAQFES 338
           +LALGELEF+K F++  YL     G              +V+S D IR  K + M  +E 
Sbjct: 146 LLALGELEFKKAFLLLTYLGGKSLG--------------EVISGDEIRQWKDLPMVAYER 191

Query: 339 RIWSTFGHDNISSSDRAKNLDSGPGMSKVYHCNVEIRGGTVVKIFKGPYIENRRTHLQKV 398
            +W   G +     +    L+S  G +  Y C+V   G   +K   G ++EN  THL KV
Sbjct: 192 AVWFKLGQN-----EERMQLESDSGKTHYYQCHVAPDGSYRLK---GYFLENTGTHLHKV 243

Query: 399 LGDDNVLVVKFMEISSDTETDLSTYLEH----YHKVAEEGIVLGLRCYRFFLYKDGGKEN 454
           LGDDNVL V+F ++  +     STY ++    Y ++A+ GI++GLR Y+FF++KDGGK  
Sbjct: 244 LGDDNVLTVRFDQLPKE-----STYCDNPYSKYKEIAKNGIMVGLRRYQFFVFKDGGKAE 298

Query: 455 K 455
           K
Sbjct: 299 K 299



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.133    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,559,112
Number of extensions: 463122
Number of successful extensions: 1322
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1315
Number of HSP's successfully gapped: 3
Length of query: 456
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 354
Effective length of database: 8,310,137
Effective search space: 2941788498
Effective search space used: 2941788498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)