Os01g0195500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Density-regulated protein DRP1 family protein.
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Os01g0195500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Density-regulated protein DRP1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.54 | 0.173 | 13.2 | -0.147 | 0.751 | -0.291 | -0.875 | 0.601 | -0.0118 | 13.7 | 20.7 | 797 | -- | -- |
| 14.39 | 0.177 | 13.2 | -0.228 | 0.733 | -0.388 | -1.04 | -- | -0.0295 | 13.6 | 20.28 | 1033 | -- | -- |
| 16.28 | 0.188 | 13.2 | -0.12 | 0.753 | -0.285 | -- | 0.834 | 0.00532 | 13.7 | 20.8 | 915 | -- | -- |
| 18.26 | 0.199 | 13.2 | -0.271 | 0.74 | -0.403 | -- | -- | -0.0372 | 13.8 | 20.38 | 961 | -- | -- |
| 49.11 | 0.326 | 13.1 | -0.00648 | -- | -0.406 | -- | 1.02 | 0.0311 | -- | 20.7 | 923 | -- | -- |
| 17.96 | 0.199 | 13.2 | -0.396 | 0.784 | -- | -1.05 | -- | -0.12 | 13.5 | -- | -- | -- | -- |
| 22.41 | 0.222 | 13.2 | -0.431 | 0.786 | -- | -- | -- | -0.126 | 13.6 | -- | -- | -- | -- |
| 50.09 | 0.33 | 13.2 | -0.176 | -- | -0.669 | -- | -- | -0.0218 | -- | 19.58 | 959 | -- | -- |
| 19.06 | 0.203 | 13.2 | -- | 0.711 | -0.547 | -- | -- | -0.018 | 13.5 | 18.9 | 2425 | -- | -- |
| 60.13 | 0.362 | 13.2 | -0.463 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 27.3 | 0.244 | 13.2 | -- | 0.794 | -- | -- | -- | -0.0778 | 13.6 | -- | -- | -- | -- |
| 50.65 | 0.331 | 13.2 | -- | -- | -0.767 | -- | -- | 0.00752 | -- | 19.6 | 960 | -- | -- |
| 65.77 | 0.379 | 13.2 | -- | -- | -- | -- | -- | -0.0918 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.50 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 18 |
| 3 | 13.51 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 13 | 13.55 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 14 | 13.55 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 18 |
| 16 | 13.55 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 20 |
| 30 | 13.58 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 38 | 13.60 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 5 |
| 45 | 13.61 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 53 | 13.62 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 68 | 13.64 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 78 | 13.65 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 79 | 13.65 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 19 |
| 81 | 13.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 84 | 13.66 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 21 |
| 92 | 13.67 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 16 |
| 106 | 13.68 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 21 |
| 124 | 13.70 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 23 |
| 143 | 13.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 158 | 13.74 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 14 |
| 218 | 13.79 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 3 |
| 219 | 13.79 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 10 |
| 228 | 13.80 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 7 |
| 251 | 13.81 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 255 | 13.82 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 261 | 13.83 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 273 | 13.84 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 289 | 13.86 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 291 | 13.86 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 336 | 13.91 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 407 | 14.00 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 440 | 14.03 | temperature | 20 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 608 | 14.17 | temperature | 20 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 754 | 14.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 764 | 14.28 | temperature | 25 | 720 | < th | dose dependent | sin | 7 | NA |
| 784 | 14.29 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 807 | 14.31 | humidity | 50 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 831 | 14.32 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 8 |
| 854 | 14.33 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 870 | 14.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 930 | 14.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 943 | 14.39 | radiation | 30 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 992 | 14.41 | humidity | 50 | 43200 | > th | dose independent | rect. | 21 | 4 |