Os01g0188200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0188200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 140.08 | 0.556 | 5.14 | 1.02 | 3.02 | 0.128 | 0.533 | 4.43 | 0.0946 | 6.88 | 10.9 | 3888 | -- | -- |
| 151.5 | 0.573 | 5.34 | -0.118 | 2.9 | 0.461 | 0.344 | -- | -0.341 | 6.92 | 32.8 | 11661 | -- | -- |
| 140.75 | 0.553 | 5.14 | 1.03 | 3.02 | 0.141 | -- | 4.4 | 0.0936 | 6.88 | 10.3 | 4009 | -- | -- |
| 145.46 | 0.562 | 5.35 | -0.357 | 3.03 | 0.53 | -- | -- | -0.398 | 6.86 | 32.29 | 30717 | -- | -- |
| 612.97 | 1.16 | 5.3 | 0.544 | -- | -1.28 | -- | 1.77 | 0.106 | -- | 6.116 | 4195 | -- | -- |
| 157.99 | 0.589 | 5.31 | -0.002 | 3.02 | -- | 0.538 | -- | -0.184 | 6.85 | -- | -- | -- | -- |
| 158.73 | 0.59 | 5.31 | 0.00739 | 3.03 | -- | -- | -- | -0.185 | 6.85 | -- | -- | -- | -- |
| 484.22 | 1.02 | 5.37 | 0.992 | -- | -2 | -- | -- | 0.147 | -- | 24.4 | 505 | -- | -- |
| 148.79 | 0.568 | 5.35 | -- | 3.02 | 0.523 | -- | -- | -0.388 | 6.87 | 32.1 | 30692 | -- | -- |
| 638.19 | 1.18 | 5.37 | 0.073 | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
| 158.73 | 0.589 | 5.31 | -- | 3.03 | -- | -- | -- | -0.186 | 6.85 | -- | -- | -- | -- |
| 473.97 | 1.01 | 5.33 | -- | -- | -2.35 | -- | -- | 0.0399 | -- | 24.4 | 455 | -- | -- |
| 638.33 | 1.18 | 5.37 | -- | -- | -- | -- | -- | -0.136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.33 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 2 | 131.37 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 6 | 132.37 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 11 | 132.49 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 21 | 132.76 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 24 | 132.90 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 25 | 133.02 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 27 | 133.11 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 28 | 133.11 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 30 | 133.11 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 33 | 133.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 36 | 133.21 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 3 |
| 48 | 133.44 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 49 | 133.44 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 50 | 133.46 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 54 | 133.50 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 65 | 133.73 | radiation | 40 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 68 | 133.80 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 87 | 134.07 | radiation | 10 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 91 | 134.12 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 94 | 134.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 110 | 134.54 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 7 |
| 116 | 134.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 123 | 134.77 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 128 | 134.88 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 143 | 134.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 144 | 134.97 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 148 | 135.00 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 167 | 135.29 | humidity | 50 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 171 | 135.33 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 21 |
| 172 | 135.34 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 19 |
| 174 | 135.34 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 180 | 135.35 | radiation | 10 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 183 | 135.36 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 188 | 135.38 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 191 | 135.39 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 195 | 135.39 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 216 | 135.40 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 221 | 135.41 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 16 |
| 229 | 135.41 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 21 |
| 236 | 135.42 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 269 | 135.43 | temperature | 20 | 43200 | < th | dose independent | rect. | 2 | 23 |
| 305 | 135.45 | temperature | 20 | 43200 | > th | dose independent | rect. | 3 | 22 |
| 312 | 135.46 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 324 | 135.46 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 22 |
| 330 | 135.47 | temperature | 20 | 43200 | < th | dose independent | sin | 5 | NA |
| 331 | 135.47 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 354 | 135.47 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 358 | 135.48 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 427 | 135.51 | temperature | 20 | 43200 | < th | dose independent | sin | 13 | NA |
| 429 | 135.51 | temperature | 20 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 451 | 135.52 | temperature | 20 | 43200 | > th | dose independent | sin | 4 | NA |
| 467 | 135.52 | radiation | 1 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 473 | 135.53 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 479 | 135.53 | temperature | 20 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 484 | 135.53 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 583 | 135.57 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 584 | 135.58 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 599 | 135.59 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 613 | 135.60 | temperature | 20 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 705 | 135.66 | temperature | 20 | 43200 | > th | dose independent | sin | 12 | NA |
| 732 | 135.68 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 760 | 135.70 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 765 | 135.71 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 7 |
| 787 | 135.73 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 834 | 135.79 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 893 | 135.88 | humidity | 90 | 14400 | > th | dose independent | sin | 10 | NA |
| 905 | 135.89 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 915 | 135.91 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 7 |