Os01g0187700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0187700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.1 | 0.438 | 7.36 | 0.271 | 1.61 | 1.36 | 0.895 | -1.94 | -0.405 | 19.6 | 25.7 | 333 | -- | -- |
| 87.93 | 0.437 | 7.34 | 0.474 | 1.61 | 1.19 | 0.685 | -- | -0.364 | 19.5 | 25.6 | 363 | -- | -- |
| 88.9 | 0.439 | 7.35 | 0.343 | 1.6 | 1.31 | -- | -1.15 | -0.376 | 19.5 | 25.87 | 369 | -- | -- |
| 89.14 | 0.44 | 7.34 | 0.474 | 1.61 | 1.19 | -- | -- | -0.35 | 19.4 | 25.7 | 371 | -- | -- |
| 175.45 | 0.617 | 7.34 | 0.12 | -- | 2.45 | -- | -0.957 | -0.554 | -- | 24.8 | 489 | -- | -- |
| 111.14 | 0.494 | 7.33 | 0.686 | 2.09 | -- | 1.07 | -- | -0.292 | 19 | -- | -- | -- | -- |
| 114.09 | 0.5 | 7.33 | 0.667 | 2.09 | -- | -- | -- | -0.289 | 19 | -- | -- | -- | -- |
| 177.03 | 0.62 | 7.33 | 0.211 | -- | 2.41 | -- | -- | -0.499 | -- | 24.98 | 501 | -- | -- |
| 94.77 | 0.453 | 7.35 | -- | 1.54 | 1.3 | -- | -- | -0.412 | 19.5 | 25.56 | 393 | -- | -- |
| 344.06 | 0.867 | 7.29 | 0.624 | -- | -- | -- | -- | -0.327 | -- | -- | -- | -- | -- |
| 125.81 | 0.525 | 7.35 | -- | 2.08 | -- | -- | -- | -0.363 | 19 | -- | -- | -- | -- |
| 178.17 | 0.622 | 7.33 | -- | -- | 2.44 | -- | -- | -0.53 | -- | 24.91 | 506 | -- | -- |
| 354.33 | 0.879 | 7.3 | -- | -- | -- | -- | -- | -0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.70 | temperature | 25 | 90 | > th | dose dependent | sin | 18 | NA |
| 2 | 86.71 | temperature | 25 | 270 | > th | dose dependent | sin | 21 | NA |
| 6 | 86.97 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 10 | 87.01 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 27 | 87.16 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 11 |
| 101 | 87.90 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 104 | 87.91 | temperature | 25 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 195 | 88.96 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 9 |
| 238 | 89.58 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 248 | 89.66 | temperature | 25 | 720 | > th | dose dependent | sin | 3 | NA |
| 275 | 89.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 309 | 89.89 | temperature | 25 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 347 | 90.16 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 401 | 90.45 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 17 |
| 419 | 90.51 | humidity | 80 | 1440 | < th | dose dependent | sin | 2 | NA |
| 422 | 90.51 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 438 | 90.55 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 16 |
| 444 | 90.56 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 10 |
| 448 | 90.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 15 |
| 458 | 90.59 | temperature | 10 | 720 | > th | dose dependent | sin | 23 | NA |
| 465 | 90.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 503 | 90.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 9 |
| 590 | 90.91 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 633 | 90.98 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 642 | 91.00 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 644 | 91.01 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 648 | 91.01 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 719 | 91.07 | humidity | 50 | 720 | > th | dose dependent | rect. | 1 | 18 |
| 768 | 91.13 | temperature | 30 | 720 | < th | dose independent | rect. | 10 | 17 |
| 790 | 91.16 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 829 | 91.25 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 22 |
| 857 | 91.28 | humidity | 50 | 270 | > th | dose dependent | rect. | 7 | 15 |
| 920 | 91.36 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 927 | 91.37 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 15 |
| 935 | 91.38 | humidity | 60 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 947 | 91.39 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 955 | 91.40 | radiation | 10 | 1440 | > th | dose independent | sin | 5 | NA |
| 967 | 91.42 | temperature | 30 | 270 | < th | dose independent | sin | 18 | NA |
| 968 | 91.42 | temperature | 30 | 720 | < th | dose independent | sin | 2 | NA |