Os01g0186600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0186600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 847.84 | 1.37 | 9.2 | 5.08 | 0.764 | 3.39 | -1.15 | -17.8 | 1.78 | 1.46 | 0.9108 | 4271 | 5.98 | 1.18 |
| 1118.71 | 1.56 | 8.9 | 5.12 | 1.14 | 3.33 | -1.11 | -- | 1.88 | 0.602 | 1.581 | 3600 | 5.38 | 1.17 |
| 853.12 | 1.36 | 9.2 | 5.09 | 0.761 | 3.4 | -- | -17.7 | 1.79 | 1.42 | 0.9 | 4297 | 5.99 | 1.18 |
| 1086.19 | 1.53 | 8.78 | 5.6 | 1.07 | 2.31 | -- | -- | 1.86 | 0.081 | 1.319 | 3485 | 5.44 | 1.18 |
| 888.84 | 1.39 | 9.2 | 5.13 | -- | 3.38 | -- | -17.8 | 1.79 | -- | 0.9 | 4297 | 5.99 | 1.18 |
| 1185.1 | 1.61 | 8.8 | 6.03 | 0.787 | -- | -1.02 | -- | 1.35 | 1.83 | -- | -- | -- | -- |
| 1189.12 | 1.61 | 8.8 | 6.06 | 0.785 | -- | -- | -- | 1.35 | 1.69 | -- | -- | -- | -- |
| 1105.77 | 1.55 | 8.7 | 5.56 | -- | 2.5 | -- | -- | 1.92 | -- | 1.359 | 3238 | 5.45 | 1.13 |
| 1771.75 | 1.96 | 8.79 | -- | 1.01 | 3.52 | -- | -- | 1.78 | 0.608 | 1.525 | 4445 | 5.53 | 1.2 |
| 1226.61 | 1.64 | 8.79 | 6.09 | -- | -- | -- | -- | 1.37 | -- | -- | -- | -- | -- |
| 2157.59 | 2.17 | 8.95 | -- | 0.896 | -- | -- | -- | 0.679 | 1.9 | -- | -- | -- | -- |
| 1775.81 | 1.96 | 8.62 | -- | -- | 4.73 | -- | -- | 1.99 | -- | 1.69 | 4338 | 5.4 | 1.26 |
| 2206.11 | 2.19 | 8.94 | -- | -- | -- | -- | -- | 0.696 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 854.60 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 2 | 857.62 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 5 | 874.50 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 6 | 874.77 | wind | 1 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 12 | 881.12 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 16 |
| 13 | 881.99 | humidity | 90 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 23 | 883.17 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 12 |
| 24 | 883.19 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 14 |
| 30 | 883.77 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 35 | 884.00 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 36 | 884.07 | humidity | 70 | 43200 | < th | dose dependent | rect. | 23 | 10 |
| 55 | 885.60 | wind | 1 | 14400 | < th | dose dependent | sin | 9 | NA |
| 65 | 886.11 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 66 | 886.16 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 70 | 886.39 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 119 | 890.05 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 124 | 890.39 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 128 | 890.57 | temperature | 20 | 4320 | < th | dose dependent | rect. | 19 | 12 |
| 132 | 890.77 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 158 | 892.02 | humidity | 50 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 166 | 892.36 | temperature | 20 | 4320 | < th | dose dependent | sin | 10 | NA |
| 233 | 894.10 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 270 | 895.01 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 22 |
| 271 | 895.08 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 331 | 896.21 | wind | 5 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 336 | 896.26 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 352 | 896.71 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 366 | 897.00 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 22 |
| 394 | 897.56 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 400 | 897.65 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 453 | 898.52 | temperature | 20 | 4320 | < th | dose dependent | rect. | 22 | 23 |
| 495 | 899.10 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 516 | 899.39 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 518 | 899.44 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 521 | 899.50 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 545 | 899.96 | wind | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 559 | 900.24 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 580 | 900.53 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 590 | 900.66 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 641 | 901.52 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 642 | 901.57 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 655 | 901.79 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 755 | 903.58 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 9 |
| 809 | 904.23 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 862 | 905.05 | humidity | 80 | 43200 | < th | dose independent | sin | 13 | NA |
| 864 | 905.07 | humidity | 60 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 870 | 905.20 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 886 | 905.51 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 897 | 905.63 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 955 | 906.35 | humidity | 80 | 43200 | > th | dose independent | sin | 13 | NA |
| 988 | 906.73 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 13 |