Os01g0182400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0182400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.22 | 0.236 | 9.49 | 0.925 | 0.422 | 0.835 | 0.42 | 0.391 | 0.107 | 12.2 | 2.755 | 1412 | -- | -- |
| 25.26 | 0.234 | 9.49 | 0.913 | 0.402 | 0.77 | 0.47 | -- | 0.108 | 12.2 | 3.372 | 1397 | -- | -- |
| 25.8 | 0.237 | 9.49 | 0.931 | 0.365 | 0.833 | -- | 0.488 | 0.102 | 12.2 | 3.038 | 1388 | -- | -- |
| 26.02 | 0.238 | 9.48 | 0.982 | 0.378 | 0.802 | -- | -- | 0.118 | 12.3 | 3.329 | 1392 | -- | -- |
| 29.35 | 0.252 | 9.49 | 0.928 | -- | 1.14 | -- | 0.542 | 0.119 | -- | 3.104 | 1313 | -- | -- |
| 34.13 | 0.274 | 9.51 | 0.816 | 0.491 | -- | 0.546 | -- | -0.00447 | 12.2 | -- | -- | -- | -- |
| 35.42 | 0.279 | 9.51 | 0.838 | 0.489 | -- | -- | -- | -0.002 | 12.2 | -- | -- | -- | -- |
| 29.88 | 0.255 | 9.49 | 0.984 | -- | 1.11 | -- | -- | 0.122 | -- | 3.339 | 1310 | -- | -- |
| 48.25 | 0.324 | 9.5 | -- | 0.348 | 0.583 | -- | -- | 0.0488 | 11.5 | 9.669 | 1374 | -- | -- |
| 50.49 | 0.332 | 9.52 | 0.822 | -- | -- | -- | -- | -0.00924 | -- | -- | -- | -- | -- |
| 53.92 | 0.343 | 9.53 | -- | 0.478 | -- | -- | -- | -0.0953 | 12.1 | -- | -- | -- | -- |
| 52.14 | 0.336 | 9.52 | -- | -- | 0.826 | -- | -- | 0.0052 | -- | 9.514 | 1249 | -- | -- |
| 68.31 | 0.386 | 9.54 | -- | -- | -- | -- | -- | -0.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.55 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 3 | 25.63 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 5 | 25.89 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 9 | 25.99 | radiation | 1.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 10 | 25.99 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 15 |
| 13 | 26.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 16 | 26.06 | radiation | 1.0 | 1440 | < th | dose independent | sin | 14 | NA |
| 28 | 26.20 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 32 | 26.23 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 46 | 26.27 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 48 | 26.27 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 79 | 26.33 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 81 | 26.34 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 91 | 26.35 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 94 | 26.35 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 98 | 26.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 103 | 26.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 104 | 26.37 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 115 | 26.42 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 20 |
| 122 | 26.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 133 | 26.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 160 | 26.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 163 | 26.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 168 | 26.49 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 170 | 26.49 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 7 | 6 |
| 171 | 26.49 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 173 | 26.50 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 177 | 26.50 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 180 | 26.51 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 184 | 26.51 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 187 | 26.52 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 8 |
| 198 | 26.53 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 200 | 26.53 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 204 | 26.54 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 214 | 26.55 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 217 | 26.55 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 220 | 26.55 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 221 | 26.55 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 13 |
| 223 | 26.56 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 8 |
| 247 | 26.58 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 261 | 26.58 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 263 | 26.59 | wind | 5.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 264 | 26.59 | radiation | 1.0 | 1440 | > th | dose independent | no | NA | NA |
| 265 | 26.59 | radiation | 1.0 | 1440 | < th | dose independent | sin | 21 | NA |
| 271 | 26.59 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 278 | 26.59 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 354 | 26.60 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 369 | 26.61 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 370 | 26.61 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 373 | 26.61 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 403 | 26.61 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 416 | 26.62 | radiation | 1.0 | 1440 | < th | dose independent | no | NA | NA |
| 439 | 26.62 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 448 | 26.62 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 482 | 26.63 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 497 | 26.64 | wind | 5.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 540 | 26.66 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 546 | 26.67 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 554 | 26.67 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 573 | 26.69 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 575 | 26.70 | wind | 5.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 583 | 26.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 598 | 26.71 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 604 | 26.72 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 607 | 26.72 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 608 | 26.72 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 612 | 26.72 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 621 | 26.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 631 | 26.73 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 14 | 7 |
| 651 | 26.74 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 656 | 26.74 | wind | 3.0 | 43200 | > th | dose dependent | sin | 4 | NA |
| 667 | 26.74 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 17 |
| 708 | 26.77 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 13 |
| 737 | 26.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 759 | 26.78 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 796 | 26.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 820 | 26.80 | wind | 1.0 | 43200 | > th | dose dependent | sin | 6 | NA |
| 821 | 26.80 | wind | 7.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 825 | 26.80 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 841 | 26.81 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 863 | 26.81 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 888 | 26.82 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 893 | 26.82 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 927 | 26.83 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 928 | 26.83 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 931 | 26.83 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 967 | 26.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 20 |
| 973 | 26.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 22 |
| 980 | 26.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 985 | 26.84 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 989 | 26.84 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 992 | 26.84 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 20 | NA |